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BaseInfo

ncRNA ID novel_ath_miR198
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:18301695-18301874 [-]
Reference genome TAIR10
Source SRR1842775
Length 24
Mature sequence(if miRNA) 157 - AAGGUUUUAAAAGAUUUACAAGGG - 180
Stem-loop(if miRNA) --AA                      -A     A    -        C           -            AUUCUUG    -UUC      A
    GGUUUUAAAAGAUUUACAAGGG  UUUUA AAGG UUUUAAAA AUUUACAAGAG UUUUUAAAGGGU       UAAA    UUUAAA A
    ||||||||||||||||||||||  ||||| |||| |||||||| ||||||||||| ||||||||||||       ||||    |||||| U
    CCAAAAUUUUUUAAAUGUUUCC  AAAAU UUCC AAAAUUUU UAAAUGUUCUC AAAAAUUUCCCA       AUUU    AAAUUU A
UUUC                      AA     A    C        A           U            -----AA    CCCA      U
Stem-loop sequence AAGGUUUUAAAAGAUUUACAAGGGAUUUUAAAAGGUUUUAAAACAUUUACAAGAGUUUUUAAAGGGUAUUCUUGUAAAUUCUUUAAAAAUAUUUUAAAACCCUUUAAAACCCUUUAAAAAUCUCUUGUAAAUAUUUUAAAACCCUUAUAAAAAACCUUUGUAAAUUUUUUAAAACCCUUU