ncRNA ID | novel_ath_miR198 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:18301695-18301874 [-] |
Reference genome | TAIR10 |
Source | SRR1842775 |
Length | 24 |
Mature sequence(if miRNA) | 157 - AAGGUUUUAAAAGAUUUACAAGGG - 180 |
Stem-loop(if miRNA) |
--AA                      -A     A    -        C           -            AUUCUUG    -UUC      A     GGUUUUAAAAGAUUUACAAGGG  UUUUA AAGG UUUUAAAA AUUUACAAGAG UUUUUAAAGGGU       UAAA    UUUAAA A     ||||||||||||||||||||||  ||||| |||| |||||||| ||||||||||| ||||||||||||       ||||    |||||| U     CCAAAAUUUUUUAAAUGUUUCC  AAAAU UUCC AAAAUUUU UAAAUGUUCUC AAAAAUUUCCCA       AUUU    AAAUUU A UUUC                      AA     A    C        A           U            -----AA    CCCA      U |
Stem-loop sequence | AAGGUUUUAAAAGAUUUACAAGGGAUUUUAAAAGGUUUUAAAACAUUUACAAGAGUUUUUAAAGGGUAUUCUUGUAAAUUCUUUAAAAAUAUUUUAAAACCCUUUAAAACCCUUUAAAAAUCUCUUGUAAAUAUUUUAAAACCCUUAUAAAAAACCUUUGUAAAUUUUUUAAAACCCUUU |