ncRNA ID | novel_ath_miR187 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:12673433-12673485 [-] |
Reference genome | TAIR10 |
Source | SRR1842775 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUGUAUGAUUGAGUAUAAGAACU - 24 |
Stem-loop(if miRNA) |
--      G      A    -   A A   UUUUUG AUUCAA UAUG ACU G U   |||||| |||||| |||| ||| |   AAGAAU UGAGUU GUAU UGA C A UC      A      A    G   G U |
Stem-loop sequence | UUUUUGGAUUCAAAUAUGACUAGAUAUCGAGUGUAUGAUUGAGUAUAAGAACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_125027.1 |
|
2.5 | Arabidopsis thaliana F-box/RNI-like/FBD-like domains-containing protein partial mRNA | F-box/RNI-like/FBD-like domains-containing protein(AT5G56440) | coding protein | psRNATarget | |||||||||
BX814147.1 |
|
2.5 | Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZC06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) | NA | coding protein | psRNATarget |