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BaseInfo

ncRNA ID novel_ath_miR186
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:17449997-17450051 [+]
Reference genome TAIR10
Source SRR1842775
Length 21
Mature sequence(if miRNA) 1 - GUUUGUUGCGAAUUGUAUGGG - 21
Stem-loop(if miRNA) ---GUUU   GC        U    UCG
       GUU  GAAUUGUA GGGC   G
       |||  |||||||| ||||   U
       CAG  UUUGGCAU UCUG   C
GCUAGUU   -A        C    UUC
Stem-loop sequence GUUUGUUGCGAAUUGUAUGGGCUCGGUCCUUGUCUCUACGGUUUAGACUUGAUCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001336663.1
ncRNA:21   GGGUA-UGUUAAGCGUUGUUUG   1
  =**||-||||||||||||||||
targets:549   UGAAUCACAAUUCGCAACAAAC   570

3.0 Arabidopsis thaliana NAD(P)-binding Rossmann-fold superfamily protein mRNA NAD(P)-binding Rossmann-fold superfamily protein(AT2G37540) coding protein psRNATarget
BT001244.1
ncRNA:21   GGGUA-UGUUAAGCGUUGUUUG   1
  =**||-||||||||||||||||
targets:402   UGAAUCACAAUUCGCAACAAAC   423

3.0 Arabidopsis thaliana putative oxidoreductase (At2g37540) mRNA, complete cds NA coding protein psRNATarget
AY099558.1
ncRNA:21   GGGUA-UGUUAAGCGUUGUUUG   1
  =**||-||||||||||||||||
targets:549   UGAAUCACAAUUCGCAACAAAC   570

3.0 Arabidopsis thaliana putative oxidoreductase (At2g37540) mRNA, complete cds NA coding protein psRNATarget
NM_129309.4
ncRNA:21   GGGUA-UGUUAAGCGUUGUUUG   1
  =**||-||||||||||||||||
targets:643   UGAAUCACAAUUCGCAACAAAC   664

3.0 Arabidopsis thaliana NAD(P)-binding Rossmann-fold superfamily protein mRNA NAD(P)-binding Rossmann-fold superfamily protein(AT2G37540) coding protein psRNATarget