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BaseInfo

ncRNA ID novel_ath_miR183
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:13506453-13506561 [-]
Reference genome TAIR10
Source SRR1842775
Length 23
Mature sequence(if miRNA) 1 - UUUCUUGUUUCGGUCUUUAGACA - 23
Stem-loop(if miRNA) --   UU          UU     UG     U     --UUC  AGUACCCACGGC
  UCU  AGACUGAAAC  GAGAC  AACAU GAUCC     UU            U
  |||  ||||||||||  |||||  ||||| |||||     ||
  AGA  UCUGGCUUUG  CUUUG  UUGUA CUAGG     AG            U
AC   UU          UU     GU     -     UCUAC  ACACACUAAAAU
Stem-loop sequence UCUUUAGACUGAAACUUGAGACUGAACAUUGAUCCUUCUUAGUACCCACGGCUUUAAAAUCACACAGACAUCUGGAUCAUGUUUGGUUUCUUGUUUCGGUCUUUAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001342074.1
ncRNA:23   ACAGAUUUCUGGCUUUGUUCUUU   1
  |||||||||||=|||||||||||
targets:645   UGUCUAAAGACUGAAACAAGAAA   667

1.5 Arabidopsis thaliana hypothetical protein mRNA hypothetical protein(AT4G31355) coding protein psRNATarget