ncRNA ID | novel_ath_miR183 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:13506453-13506561 [-] |
Reference genome | TAIR10 |
Source | SRR1842775 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UUUCUUGUUUCGGUCUUUAGACA - 23 |
Stem-loop(if miRNA) |
--   UU          UU     UG     U     --UUC  AGUACCCACGGC   UCU  AGACUGAAAC  GAGAC  AACAU GAUCC     UU            U   |||  ||||||||||  |||||  ||||| |||||     ||   AGA  UCUGGCUUUG  CUUUG  UUGUA CUAGG     AG            U AC   UU          UU     GU     -     UCUAC  ACACACUAAAAU |
Stem-loop sequence | UCUUUAGACUGAAACUUGAGACUGAACAUUGAUCCUUCUUAGUACCCACGGCUUUAAAAUCACACAGACAUCUGGAUCAUGUUUGGUUUCUUGUUUCGGUCUUUAGACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001342074.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein mRNA | hypothetical protein(AT4G31355) | coding protein | psRNATarget |