ncRNA ID | novel_ath_miR179 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:11580703-11580761 [-] |
Reference genome | TAIR10 |
Source | SRR1842775 |
Length | 22 |
Mature sequence(if miRNA) | 38 - AGGAAGUCGGCUGGGCGAUCUC - 59 |
Stem-loop(if miRNA) |
---    A    G  G        ---   UA    AGGA GUCG CU GGCGAUCU   CCC  C    |||| |||| || ||||||||   |||    UCCU CAGC GG CUGCUGGA   GGG  U UAU    C    -  G        AUU   CU |
Stem-loop sequence | AGGAAGUCGGCUGGGCGAUCUCCCUACUUCGGGUUAAGGUCGUCGGGCGACCUCCUUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001335310.1 |
|
2.5 | Arabidopsis thaliana SCR-like 16 (SCRL16), mRNA | SCR-like 16(SCRL16) | coding protein | psRNATarget |