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BaseInfo

ncRNA ID	novel_ath_miR177
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr2:3469782-3469855 [+]
Reference genome	TAIR10
Source	SRR1842774
Length	24
Mature sequence(if miRNA)	51 - AGGGGUUUGGUGAACCAACUGGUC - 74
Stem-loop(if miRNA)	--G       -G   UG       UCGG   UG AGAA  U    UAGUUGG  CAC  GAUCCCU    ACC  G    CG G    |||||||  |||  |||||||    |||  |    || U    GUCAACC  GUG  UUGGGGA    UGG  C    GC G CUG       AA   GU       ----   GU ----  A
Stem-loop sequence	GUAGUUGGGCACUGGAUCCCUUCGGACCUGGAGAACGUGUGACGCUGGGUAGGGGUUUGGUGAACCAACUGGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK229842.1	ncRNA:24   CUGGUCAACCAAGUGGUUUGGGGA   1   |||||||||||||||||||||||| targets:1169   GACCAGUUGGUUCACCAAACCCCU   1192 Target Full Sequence	0.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-02-N23	NA	coding protein	psRNATarget
AY743925.1	ncRNA:24   CUGGUCAACCAAGUGGUUUGGGGA   1   |*==|||||*||||=||||||||| targets:1619   GCUUAGUUGAUUCAUCAAACCCCU   1642 Target Full Sequence	2.5	Arabidopsis thaliana SCAR3 (SCAR3) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001123904.2	ncRNA:24   CUGGUCAACCAAGUGGUUUGGGGA   1   |*==|||||*||||=||||||||| targets:1905   GCUUAGUUGAUUCAUCAAACCCCU   1928 Target Full Sequence	2.5	Arabidopsis thaliana SCAR family protein (WAVE2), mRNA	SCAR family protein(WAVE2)	coding protein	psRNATarget
NM_102658.3	ncRNA:24   CUGGUCAACCAAGUGGUUUGGGGA   1   |*==|||||*||||=||||||||| targets:1932   GCUUAGUUGAUUCAUCAAACCCCU   1955 Target Full Sequence	2.5	Arabidopsis thaliana SCAR family protein (WAVE2), mRNA	SCAR family protein(WAVE2)	coding protein	psRNATarget
NM_001123903.2	ncRNA:24   CUGGUCAACCAAGUGGUUUGGGGA   1   |*==|||||*||||=||||||||| targets:1932   GCUUAGUUGAUUCAUCAAACCCCU   1955 Target Full Sequence	2.5	Arabidopsis thaliana SCAR family protein (WAVE2), mRNA	SCAR family protein(WAVE2)	coding protein	psRNATarget