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BaseInfo

ncRNA ID	novel_ath_miR176
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:15198935-15199034 [-]
Reference genome	TAIR10
Source	SRR1842774
Length	24
Mature sequence(if miRNA)	77 - UAAGGUUUUGCUGUUAGGGUUUAG - 100
Stem-loop(if miRNA)	-UA   UU   C       G     G UU    G      -A  U  GGU    AGG  UUG UGUUAGG UUUAG U  UAAG UUUAGU  UG AC   U    |||  ||| ||||||| ||||| |  |||| ||||||  || ||    UUU  GAU GCGAUUU GAAUU G  AUUU GGAUUA  AU UG   U GGA   GG   U       G     G GC    G      AG  U  GGA
Stem-loop sequence	UAAGGUUUUGCUGUUAGGGUUUAGGUUUUAAGGUUUAGUAUGUACGGUUUAGGGUUUAGAAUUAGGGUUUACGGGUUAAGGUUUAGCGUUAGGGUUUAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK229468.1	ncRNA:24   GAUU------UGGGAUUGUCGUUUUGGAAU   1   ||||------=|||*||||||||||||||* targets:472   CUAAUCUUCGGCCCCAACAGCAAAACCUUC   501 Target Full Sequence	2.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-86-C19	NA	coding protein	psRNATarget
NM_104362.3	ncRNA:24   GAUU------UGGGAUUGUCGUUUUGGAAU   1   ||||------=|||*||||||||||||||* targets:615   CUAAUCUUCGGCCCCAACAGCAAAACCUUC   644 Target Full Sequence	2.0	Arabidopsis thaliana Late embryogenesis abundant (LEA) protein-like protein mRNA	Late embryogenesis abundant (LEA) protein-like protein(AT1G54890)	coding protein	psRNATarget
NM_179569.4	ncRNA:24   GAUU--UGGGAUUGUCGUUUUGGAAU   1   =|=|--|||**||||||||||||||| targets:1293   UUGAUUACCAAAACAGCAAAACCUUA   1318 Target Full Sequence	2.0	Arabidopsis thaliana gamma-glutamyl hydrolase 1 (GGH1), mRNA	gamma-glutamyl hydrolase 1(GGH1)	coding protein	psRNATarget
NM_106513.5	ncRNA:24   GAUU--UGGGAUUGUCGUUUUGGAAU   1   =|=|--|||**||||||||||||||| targets:1322   UUGAUUACCAAAACAGCAAAACCUUA   1347 Target Full Sequence	2.0	Arabidopsis thaliana gamma-glutamyl hydrolase 1 (GGH1), mRNA	gamma-glutamyl hydrolase 1(GGH1)	coding protein	psRNATarget