ncRNA ID | novel_ath_miR175 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:13067224-13067365 [+] |
Reference genome | TAIR10 |
Source | SRR1842774;SRR1842775;SRR1163504;SRR1164382;SRR1164433 |
Length | 22 |
Mature sequence(if miRNA) | 1 - CUAGAAGGUGUAGAUACUCAAC - 22 |
Stem-loop(if miRNA) |
--     AG  G        C    ACUAU         U    -U         AU    U  AGA    C   CUAGA  GU UAGAUACU AACG     AGGAGGCAA AGCU  GAGCAAAUA  UGAU GC   AGUC A   |||||  || |||||||| ||||     ||||||||| ||||  |||||||||  |||| ||   ||||   GGUCU  CA AUCUGUGA UUGU     UCCUCUGUU UCGA  UUCGUUUGU  ACUG CG   UCAG U AU     CU  A        C    -CCAU         U    CC         CC    U  AAA    C |
Stem-loop sequence | CUAGAAGGUGUAGAUACUCAACGACUAUAGGAGGCAAUAGCUUGAGCAAAUAAUUGAUUGCAGAAGUCCAUCGACUAAAGCUGUCACCUGUUUGCUUCCAGCUUUUGUCUCCUUACCUGUUCAGUGUCUAAACUCUCUGGUA |