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BaseInfo

ncRNA ID ath-miRf10453-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AACUCGAACCCGAACCUGAA - NA
Stem-loop(if miRNA)           G      AUU              UUC       -GAAAUUUA   C
UCGGGUUUGG UCAGGU   UUGGGUUCGAGUUU   GGGUUUA         AGA C
|||||||||| ||||||   ||||||||||||||   |||||||         ||| C
AGCCUAAGCC AGUCCA   AGCCCAAGCUCAAA   CCCAAAU         UCU G
          A      ---              ---       AAAUAUAUA   U
Stem-loop sequence UCGGGUUUGGGUCAGGUAUUUUGGGUUCGAGUUUUUCGGGUUUAGAAAUUUAAGACCCGUUCUAUAUAUAAAUAAACCCAAACUCGAACCCGAACCUGAACCGAAUCCGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001342211.1
ncRNA:20   AAGUCCAAGCCCAAGCUCAA   1
  *||=||||||||||||||||
targets:165   GUCGGGUUCGGGUUCGAGUU   184

1.0 Arabidopsis thaliana ADR1-like 1 (ADR1-L1), mRNA ADR1-like 1(ADR1-L1) coding protein psRNATarget
EF183173.1
ncRNA:20   AAGUCCAAGCCCAAGCUCAA   1
  |||||*||||||||||||||
targets:521   UUCAGAUUCGGGUUCGAGUU   540

1.0 Arabidopsis thaliana clone asmbl_1817 unknown mRNA sequence NA coding protein psRNATarget
NM_001036031.2
ncRNA:20   AAGUCCAAGCCCAAGCUCAA   1
  |||||*||||||||||||||
targets:521   UUCAGAUUCGGGUUCGAGUU   540

1.0 Arabidopsis thaliana cysteine/histidine-rich C1 domain protein mRNA cysteine/histidine-rich C1 domain protein(AT1G29179) coding protein psRNATarget
EF183174.1
ncRNA:20   AAGUCCAAGCCCAAGCUCAA   1
  |||||*||||||||||||||
targets:292   UUCAGAUUCGGGUUCGAGUU   311

1.0 Arabidopsis thaliana clone asmbl_1818 unknown mRNA sequence NA coding protein psRNATarget
AY085481.1
ncRNA:20   AAGUCCAAGCCCAAGCUCAA   1
  ||||||||||||||||=|||
targets:420   UUCAGGUUCGGGUUCGGGUU   439

1.5 Arabidopsis thaliana clone 15343 mRNA, complete sequence NA coding protein psRNATarget