ncRNA ID | novel_ath_miR172 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr5:11611192-11611246 [-] |
Reference genome | TAIR10 |
Source | SRR1842774 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAGAAGACCCUUUAAAAACUCUUG - 24 |
Stem-loop(if miRNA) |
--            A A     AAA  A   AGGGUUUUUAAA G UCUUU   GA U   |||||||||||| | |||||   ||   UCUCAAAAAUUU C AGAAG   CU U GU            C C     -AA  U |
Stem-loop sequence | AGGGUUUUUAAAAGAUCUUUAAAGAAUUUUCAAGAAGACCCUUUAAAAACUCUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001160870.1 |
|
2.5 | Arabidopsis thaliana Ubiquinol-cytochrome C reductase hinge protein partial mRNA | Ubiquinol-cytochrome C reductase hinge protein(AT1G15120) | coding protein | psRNATarget |