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BaseInfo

ncRNA ID	novel_ath_miR170
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr5:11512195-11512310 [+]
Reference genome	TAIR10
Source	SRR1842774;SRR1164378;SRR1164382;SRR1164434
Length	24
Mature sequence(if miRNA)	93 - UUUUGAUAGCCUGAAGUUGAGAGC - 116
Stem-loop(if miRNA)	--   UG      --    UG   U      ---GA     UC  ---   AG      GAA   UCU  AUUUUA  UUAU  AGA AAUGUU     UUUGA  GU   ACA  UGUUUU   A   |||  ||||||  ||||  ||| ||||||     |||||  ||   |||  ||||||   U   AGA  UGAAGU  GAUA  UUU UUGCGA     AAACU  CG   UGU  AUAAAA   A CG   GU      CC    GU   -      GAUUG     UC  UUU   GA      GAU
Stem-loop sequence	UCUUGAUUUUAUUAUUGAGAUAAUGUUGAUUUGAUCGUACAAGUGUUUUGAAAUAUAGAAAAUAAGUGUUUUGCCUUCAAAGUUAGAGCGUUUUUUGAUAGCCUGAAGUUGAGAGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK228546.1	ncRNA:24   CGAGAGUUGAAGUCCGAUAGUUUU   1   |||||||||||||||||||||||| targets:1081   GCUCUCAACUUCAGGCUAUCAAAA   1104 Target Full Sequence	0.0	Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL15-27-L07	NA	coding protein	psRNATarget
BX831997.1	ncRNA:24   CGAGAGUUGAAGUCCGAUAGUUUU   1   |||||||||||||||||||||||| targets:1080   GCUCUCAACUUCAGGCUAUCAAAA   1103 Target Full Sequence	0.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH45ZB01 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK229846.1	ncRNA:24   CGAGAGUUGAAGUCCGAUAGUUUU   1   |||||||||||||||||||||||| targets:543   GCUCUCAACUUCAGGCUAUCAAAA   566 Target Full Sequence	0.0	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-04-L09	NA	coding protein	psRNATarget