Search result

BaseInfo

ncRNA ID novel_ath_miR166
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:10599249-10599423 [-]
Reference genome TAIR10
Source SRR1842774;SRR1163504;SRR1164378
Length 24
Mature sequence(if miRNA) 152 - UAAAGGUAUUGUACUCUAAUGGUC - 175
Stem-loop(if miRNA) --UAA            C         CCUCU                   AC  A                 AAUUGUAGAA       U
     AGGUAUUGUACU UAAUGGUCA     AAAAUAGAGUUUUCUCAAA  UA AGGAAAAAAUAGAGAUG          AUCUCUA U
     |||||||||||| |||||||||     |||||||||||||||||||  || |||||||||||||||||          |||||||
     UCCAUAGCAUGA GUUAUCAGU     UUUUAUUUUAAAAGAGUUU  AU UCUUUUUUUAUCUCUAU          UAGAGAU U
AAAUC            A         -----                   --  A                 AAAUGAAAAA       A
Stem-loop sequence UAAAGGUAUUGUACUCUAAUGGUCACCUCUAAAAUAGAGUUUUCUCAAAACUAAAGGAAAAAAUAGAGAUGAAUUGUAGAAAUCUCUAUUUAUAGAGAUAAAAAGUAAAUAUCUCUAUUUUUUUCUAUAUUUGAGAAAAUUUUAUUUUUGACUAUUGAAGUACGAUACCUCUAAA