ncRNA ID | novel_ath_miR166 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:10599249-10599423 [-] |
Reference genome | TAIR10 |
Source | SRR1842774;SRR1163504;SRR1164378 |
Length | 24 |
Mature sequence(if miRNA) | 152 - UAAAGGUAUUGUACUCUAAUGGUC - 175 |
Stem-loop(if miRNA) |
--UAA            C         CCUCU                   AC  A                 AAUUGUAGAA       U      AGGUAUUGUACU UAAUGGUCA     AAAAUAGAGUUUUCUCAAA  UA AGGAAAAAAUAGAGAUG          AUCUCUA U      |||||||||||| |||||||||     |||||||||||||||||||  || |||||||||||||||||          |||||||      UCCAUAGCAUGA GUUAUCAGU     UUUUAUUUUAAAAGAGUUU  AU UCUUUUUUUAUCUCUAU          UAGAGAU U AAAUC            A         -----                   --  A                 AAAUGAAAAA       A |
Stem-loop sequence | UAAAGGUAUUGUACUCUAAUGGUCACCUCUAAAAUAGAGUUUUCUCAAAACUAAAGGAAAAAAUAGAGAUGAAUUGUAGAAAUCUCUAUUUAUAGAGAUAAAAAGUAAAUAUCUCUAUUUUUUUCUAUAUUUGAGAAAAUUUUAUUUUUGACUAUUGAAGUACGAUACCUCUAAA |