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BaseInfo

ncRNA ID novel_ath_miR164
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:15691774-15691850 [+]
Reference genome TAIR10
Source SRR1842774;SRR1842775;SRR3707789;SRR1163504;SRR1163720;SRR1164378;SRR1164433
Length 23
Mature sequence(if miRNA) 1 - GAUAUGAUUUUCGGUAGUGUAUA - 23
Stem-loop(if miRNA) --   AUG     CG          -----     ---    A
  GAU   AUUUU  GUAGUGUAUA     GGGGU   AGGA U
  |||   |||||  ||||||||||     |||||   |||| G
  CUA   UAAGG  UAUUACAUAU     CCCCA   UCCU U
AA   --A     AU          UAUUA     GUA    U
Stem-loop sequence GAUAUGAUUUUCGGUAGUGUAUAGGGGUAGGAAUGUUUCCUAUGACCCCAUUAUUAUACAUUAUUAGGAAUAAUCAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_125808.3
ncRNA:23   AUAUGUGAUGGCUUUUAGUAUAG   1
  |||*||*|*|||||||||||||=
targets:1317   UAUUCAAUUCCGAAAAUCAUAUU   1339

3.0 Arabidopsis thaliana Peroxidase superfamily protein mRNA Peroxidase superfamily protein(AT5G64120) coding protein psRNATarget