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BaseInfo

ncRNA ID novel_ath_miR156
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:17178490-17178569 [+]
Reference genome TAIR10
Source SRR1842772;SRR1163718;SRR1312897
Length 21
Mature sequence(if miRNA) 1 - UUGUGCGGUUCAAAUAGUAAC - 21
Stem-loop(if miRNA) --UU                   A   AUAUA      CA
    GUGCGGUUCAAAUAGUAAC AAA     UACAUA  U
    ||||||||||||||||||| |||     ||||||
    CAUGCUAAGUUUAUCAUUG UUU     AUGUAU  A
ACGU                   C   AAGAA      AU
Stem-loop sequence UUGUGCGGUUCAAAUAGUAACAAAAAUAUAUACAUACAUAUAUAUGUAAAGAAUUUCGUUACUAUUUGAAUCGUACUGCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_118292.4
ncRNA:21   CAAUGAUAAACUUGGCGUGUU   1
  **||*|||||||||*||||||
targets:869   AAUAAUAUUUGAACGGCACAA   889

2.5 Arabidopsis thaliana defensin-like protein mRNA defensin-like protein(AT4G21720) coding protein psRNATarget
NM_001203861.2
ncRNA:21   CAAUGAUAAACUUGGCGUGUU   1
  **||*|||||||||*||||||
targets:921   AAUAAUAUUUGAACGGCACAA   941

2.5 Arabidopsis thaliana defensin-like protein mRNA defensin-like protein(AT4G21720) coding protein psRNATarget
NM_001341509.1
ncRNA:21   CAAUGAUAAACUUGGCGUGUU   1
  **||*|||||||||*||||||
targets:1078   AAUAAUAUUUGAACGGCACAA   1098

2.5 Arabidopsis thaliana defensin-like protein mRNA defensin-like protein(AT4G21720) coding protein psRNATarget