ncRNA ID | novel_ath_miR156 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:17178490-17178569 [+] |
Reference genome | TAIR10 |
Source | SRR1842772;SRR1163718;SRR1312897 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGUGCGGUUCAAAUAGUAAC - 21 |
Stem-loop(if miRNA) |
--UU                   A   AUAUA      CA     GUGCGGUUCAAAUAGUAAC AAA     UACAUA  U     ||||||||||||||||||| |||     ||||||     CAUGCUAAGUUUAUCAUUG UUU     AUGUAU  A ACGU                   C   AAGAA      AU |
Stem-loop sequence | UUGUGCGGUUCAAAUAGUAACAAAAAUAUAUACAUACAUAUAUAUGUAAAGAAUUUCGUUACUAUUUGAAUCGUACUGCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_118292.4 |
|
2.5 | Arabidopsis thaliana defensin-like protein mRNA | defensin-like protein(AT4G21720) | coding protein | psRNATarget | |||||||||
NM_001203861.2 |
|
2.5 | Arabidopsis thaliana defensin-like protein mRNA | defensin-like protein(AT4G21720) | coding protein | psRNATarget | |||||||||
NM_001341509.1 |
|
2.5 | Arabidopsis thaliana defensin-like protein mRNA | defensin-like protein(AT4G21720) | coding protein | psRNATarget |