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BaseInfo

ncRNA ID	ath-miRf10451-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - AAGAAGGAGGAACAACCUGUUG - NA
Stem-loop(if miRNA)	UCC                    C                    ----AA  CUAGGU CUCUAGAUCUCAACAGGUU   UCCUCCUUCUUUCUAUUUAG UACUUGGUUUCAAUUGUUUC      GC      A |||||||||||||||||||   |||||||||||||||||||| ||||||||||||||||||||      || GAGAUCUAGAGUUGUCCAA   AGGAGGAAGAAAGAUAAAUC AUGAACCAAAGUUAACAGAG      UG      A                    -CA                    A                    AAAAAA  UAUACG
Stem-loop sequence	CUCUAGAUCUCAACAGGUUUCCUCCUCCUUCUUUCUAUUUAGCUACUUGGUUUCAAUUGUUUCAAGCCUAGGUAAGCAUAUGUAAAAAAGAGACAAUUGAAACCAAGUAACUAAAUAGAAAGAAGGAGGAACAACCUGUUGAGAUCUAGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_180620.3	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   |||*|||||||||||=|||||| targets:547   CAAGAGGUUGUUCCUUCUUCUU   568 Target Full Sequence	2.5	Arabidopsis thaliana homeobox protein knotted-1-like 6 (KNAT6), mRNA	homeobox protein knotted-1-like 6(KNAT6)	coding protein	psRNATarget
BT002930.1	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   |||*|||||||||||=|||||| targets:547   CAAGAGGUUGUUCCUUCUUCUU   568 Target Full Sequence	2.5	Arabidopsis thaliana clone RAFL14-89-I21 (R20256) putative homeodomain transcription factor KNAT6 (At1g23380) mRNA, complete cds	NA	coding protein	psRNATarget
NM_102187.4	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   |||*|||||||||||=|||||| targets:502   CAAGAGGUUGUUCCUUCUUCUU   523 Target Full Sequence	2.5	Arabidopsis thaliana homeobox protein knotted-1-like 6 (KNAT6), mRNA	homeobox protein knotted-1-like 6(KNAT6)	coding protein	psRNATarget
BX842541.1	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   |||*|||||||||||=|||||| targets:526   CAAGAGGUUGUUCCUUCUUCUU   547 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB63ZF07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BT004370.1	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   |||*|||||||||||=|||||| targets:388   CAAGAGGUUGUUCCUUCUUCUU   409 Target Full Sequence	2.5	Arabidopsis thaliana clone U20256 putative homeodomain transcription factor KNAT6 (At1g23380) mRNA, complete cds	NA	coding protein	psRNATarget
AB072362.1	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   |||*|||||||||||=|||||| targets:385   CAAGAGGUUGUUCCUUCUUCUU   406 Target Full Sequence	2.5	Arabidopsis thaliana KNAT6L mRNA for homeodomain transcription factor KNAT6, complete cds	NA	coding protein	psRNATarget
AB072361.1	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   |||*|||||||||||=|||||| targets:379   CAAGAGGUUGUUCCUUCUUCUU   400 Target Full Sequence	2.5	Arabidopsis thaliana KNAT6S mRNA for homeodomain transcription factor KNAT6, complete cds	NA	coding protein	psRNATarget
NM_114799.4	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   ||=*||*||||||||||||||* targets:597   CAGGAGUUUGUUCCUCCUUCUC   618 Target Full Sequence	3.0	Arabidopsis thaliana CTC-interacting domain 10 (CID10), mRNA	CTC-interacting domain 10(CID10)	coding protein	psRNATarget
NM_001339409.1	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   ||=*||*||||||||||||||* targets:553   CAGGAGUUUGUUCCUCCUUCUC   574 Target Full Sequence	3.0	Arabidopsis thaliana CTC-interacting domain 10 (CID10), mRNA	CTC-interacting domain 10(CID10)	coding protein	psRNATarget
NM_001035756.2	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   ||=*||*||||||||||||||* targets:623   CAGGAGUUUGUUCCUCCUUCUC   644 Target Full Sequence	3.0	Arabidopsis thaliana CTC-interacting domain 10 (CID10), mRNA	CTC-interacting domain 10(CID10)	coding protein	psRNATarget
AK317338.1	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   ||=*||*||||||||||||||* targets:581   CAGGAGUUUGUUCCUCCUUCUC   602 Target Full Sequence	3.0	Arabidopsis thaliana AT3G49390 mRNA, complete cds, clone: RAFL23-20-P11	NA	coding protein	psRNATarget
AK228892.1	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   ||=*||*||||||||||||||* targets:548   CAGGAGUUUGUUCCUCCUUCUC   569 Target Full Sequence	3.0	Arabidopsis thaliana mRNA for RNA-binding - like protein, complete cds, clone: RAFL16-20-M12	NA	coding protein	psRNATarget
NM_103013.3	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   *||*||*||||||||||||||* targets:653   GAAGAGUUUGUUCCUCCUUCUC   674 Target Full Sequence	3.0	Arabidopsis thaliana CTC-interacting domain 11 (CID11), mRNA	CTC-interacting domain 11(CID11)	coding protein	psRNATarget
NM_001036054.2	ncRNA:22   GUUGUCCAACAAGGAGGAAGAA   1   *||*||*||||||||||||||* targets:491   GAAGAGUUUGUUCCUCCUUCUC   512 Target Full Sequence	3.0	Arabidopsis thaliana CTC-interacting domain 11 (CID11), mRNA	CTC-interacting domain 11(CID11)	coding protein	psRNATarget