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BaseInfo

ncRNA ID novel_ath_miR143
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:6345366-6345537 [+]
Reference genome TAIR10
Source SRR1822372
Length 18
Mature sequence(if miRNA) 1 - AAAUCGGAUAAACAGAGU - 18
Stem-loop(if miRNA) AAAUC     ---         GAUUCUUUACAU   -C        --------UC    AG ----  AAAAAUAUGUUGAUUGUAAUGUGAAGCA
     GGAUA   AACAGAGUC            UCC  UUGUGCAU          CAAU  G    CA                            U
     |||||   |||||||||            |||  ||||||||          ||||  |    ||
     CUUGU   UUGUCUUAG            AGG  GACAUGUA          ACAC  U    UC                            U
-GUUU     GAC         -------AUCUU   CU        UAAAGUUUCG    -- GAUU  GUUAUGUAUUCGGUUUAAUAUUGAAUUC
Stem-loop sequence AAAUCGGAUAAACAGAGUCGAUUCUUUACAUUCCCUUGUGCAUUCCAAUAGGCAAAAAAUAUGUUGAUUGUAAUGUGAAGCAUUCUUAAGUUAUAAUUUGGCUUAUGUAUUGCUUUAGUCACAGCUUUGAAAUAUGUACAGUCGGAUUCUAGAUUCUGUUCAGUGUUCUUUG