ncRNA ID | novel_ath_miR143 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:6345366-6345537 [+] |
Reference genome | TAIR10 |
Source | SRR1822372 |
Length | 18 |
Mature sequence(if miRNA) | 1 - AAAUCGGAUAAACAGAGU - 18 |
Stem-loop(if miRNA) |
AAAUC     ---         GAUUCUUUACAU   -C        --------UC    AG ----  AAAAAUAUGUUGAUUGUAAUGUGAAGCA      GGAUA   AACAGAGUC            UCC  UUGUGCAU          CAAU  G    CA                            U      |||||   |||||||||            |||  ||||||||          ||||  |    ||      CUUGU   UUGUCUUAG            AGG  GACAUGUA          ACAC  U    UC                            U -GUUU     GAC         -------AUCUU   CU        UAAAGUUUCG    -- GAUU  GUUAUGUAUUCGGUUUAAUAUUGAAUUC |
Stem-loop sequence | AAAUCGGAUAAACAGAGUCGAUUCUUUACAUUCCCUUGUGCAUUCCAAUAGGCAAAAAAUAUGUUGAUUGUAAUGUGAAGCAUUCUUAAGUUAUAAUUUGGCUUAUGUAUUGCUUUAGUCACAGCUUUGAAAUAUGUACAGUCGGAUUCUAGAUUCUGUUCAGUGUUCUUUG |