ncRNA ID | novel_ath_miR142 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:13821198-13821243 [+] |
Reference genome | TAIR10 |
Source | SRR1822372 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGCGAUCUAGUAGAAAAUUGUU - 22 |
Stem-loop(if miRNA) |
--             AAAA   UU   UGCGAUCUAGUAG    UUG  A   |||||||||||||    |||   ACGCUAGAUCGUC    AGC  U UC             --AA   CC |
Stem-loop sequence | UGCGAUCUAGUAGAAAAUUGUUAUCCCGAAACUGCUAGAUCGCACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK230237.1 |
|
0.0 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-08-N03 | NA | coding protein | psRNATarget | |||||||||
AK230227.1 |
|
0.0 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-04-K18 | NA | coding protein | psRNATarget |