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BaseInfo

ncRNA ID novel_ath_miR142
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:13821198-13821243 [+]
Reference genome TAIR10
Source SRR1822372
Length 22
Mature sequence(if miRNA) 1 - UGCGAUCUAGUAGAAAAUUGUU - 22
Stem-loop(if miRNA) --             AAAA   UU
  UGCGAUCUAGUAG    UUG  A
  |||||||||||||    |||
  ACGCUAGAUCGUC    AGC  U
UC             --AA   CC
Stem-loop sequence UGCGAUCUAGUAGAAAAUUGUUAUCCCGAAACUGCUAGAUCGCACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK230237.1
ncRNA:22   UUGUUAAAAGAUGAUCUAGCGU   1
  ||||||||||||||||||||||
targets:382   AACAAUUUUCUACUAGAUCGCA   403

0.0 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-08-N03 NA coding protein psRNATarget
AK230227.1
ncRNA:22   UUGUUAAAAGAUGAUCUAGCGU   1
  ||||||||||||||||||||||
targets:382   AACAAUUUUCUACUAGAUCGCA   403

0.0 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL23-04-K18 NA coding protein psRNATarget