Search result

BaseInfo

ncRNA ID novel_ath_miR141
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:13023500-13023700 [+]
Reference genome TAIR10
Source SRR1822372
Length 24
Mature sequence(if miRNA) 1 - AAUGGAGAUGAGAAGACAUUUUGG - 24
Stem-loop(if miRNA) --          A -   ACA      A     AG  GA   AAA A -   AAAG   AAAUUCACUUUCAGAUCCAGUCGAGAGUGUCGAUCGACACACUCUUG
  AAUGGAGAUG G AAG   UUUUGG GCAAA  AC  GGA   G A GCU    GAC                                               G
  |||||||||| | |||   |||||| |||||  ||  |||   | | |||    |||                                               U
  UUACUUUUAU C UUC   AAGACC CGUUU  UG  UUA   A G AGU    UGA                                               G
AA          C A   -AG      -     AA  -G   --- - A   ---U   AUUUUCGCACUACUUGAAGAGCCUCGGCGUUGACCACACAGCUAGCU
Stem-loop sequence AAUGGAGAUGAGAAGACAUUUUGGAGCAAAAGACGAGGAAAAGAAGCUAAAGGACAAAUUCACUUUCAGAUCCAGUCGAGAGUGUCGAUCGACACACUCUUGGUGUCGAUCGACACACCAGUUGCGGCUCCGAGAAGUUCAUCACGCUUUUAAGUUUGAAGAAUUGGUAAUUUGCCCAGAAGACUUACCUAUUUUCAUUAA