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BaseInfo

ncRNA ID	ath-miRf10449-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	21
Mature sequence(if miRNA)	NA - CAUAUUUAGAAGGUGGUGGUG - NA
Stem-loop(if miRNA)	GG     --C     G     G ACCACCACCAU  UUUGG   UGGAG AGGUG A |||||||||||  |||||   ||||| ||||| UGGUGGUGGUG  AGAUU   ACCUU UUCAC U            GA     UAU     -     A
Stem-loop sequence	ACCACCACCAUGGUUUGGCUGGAGGAGGUGGAUACACUUUUCCAUAUUUAGAAGGUGGUGGUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_112976.2	ncRNA:21   GUGGUGGUGGAAGAUUUAUAC   1   ||||||||||||||||||||| targets:365   CACCACCACCUUCUAAAUAUG   385 Target Full Sequence	0.0	Arabidopsis thaliana proline-rich family protein mRNA	proline-rich family protein(AT3G20850)	coding protein	psRNATarget
AK119061.1	ncRNA:21   GUGGUGGUGGAAGAUUUAUAC   1   |||||||||||||||||||*| targets:251   CACCACCACCUUCUAAAUAAG   271 Target Full Sequence	1.5	Arabidopsis thaliana At3g13845 mRNA for unknown protein, complete cds, clone: RAFL21-40-L04	NA	coding protein	psRNATarget
NM_112238.5	ncRNA:21   GUGGUGGUGGAAGAUUUAUAC   1   |||||||||||||||||||*| targets:417   CACCACCACCUUCUAAAUAAG   437 Target Full Sequence	1.5	Arabidopsis thaliana transmembrane protein mRNA	transmembrane protein(AT3G13845)	coding protein	psRNATarget
NM_001338087.1	ncRNA:21   GUGGUGGUGGAAGAUUUAUAC   1   |||||||||||||||||||*| targets:491   CACCACCACCUUCUAAAUAAG   511 Target Full Sequence	1.5	Arabidopsis thaliana transmembrane protein mRNA	transmembrane protein(AT3G13845)	coding protein	psRNATarget
DQ446971.1	ncRNA:21   GUGGUGGUGGAAGAUUUAUAC   1   |=||||||||*|||||||||| targets:428   CGCCACCACCCUCUAAAUAUG   448 Target Full Sequence	1.5	Arabidopsis thaliana clone pENTR221-At5g19810 proline-rich extensin-like family protein (At5g19810) mRNA, complete cds	NA	coding protein	psRNATarget
NM_001343624.1	ncRNA:21   GUGGUGGUGGAAGAUUUAUAC   1   |=||||||||*|||||||||| targets:340   CGCCACCACCCUCUAAAUAUG   360 Target Full Sequence	1.5	Arabidopsis thaliana hydroxyproline-rich glycoprotein family protein mRNA	hydroxyproline-rich glycoprotein family protein(AT5G19800)	coding protein	psRNATarget
DQ056683.1	ncRNA:21   GUGGUGGUGGAAGAUUUAUAC   1   |=||||||||*|||||||||| targets:671   CGCCACCACCCUCUAAAUAUG   691 Target Full Sequence	1.5	Arabidopsis thaliana proline-rich extensin-like family protein (At5g19810) mRNA, complete cds	NA	coding protein	psRNATarget
NM_121986.2	ncRNA:21   GUGGUGGUGGAAGAUUUAUAC   1   |=||||||||*|||||||||| targets:814   CGCCACCACCCUCUAAAUAUG   834 Target Full Sequence	1.5	Arabidopsis thaliana Proline-rich extensin-like family protein mRNA	Proline-rich extensin-like family protein(AT5G19810)	coding protein	psRNATarget