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BaseInfo

ncRNA ID novel_ath_miR128
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:15749653-15749740 [+]
Reference genome TAIR10
Source DRR014210
Length 23
Mature sequence(if miRNA) 66 - UUUGGAGAUAAUGGAGCAUUCUG - 88
Stem-loop(if miRNA) --    CUA  UG           GUCUUUGUU      UUU     C
  GAGU   UU  UUAUUUCUAGA         AGUUCU   CAUGU U
  ||||   ||  |||||||||||         ||||||   |||||
  CUUA   AG  AAUAGAGGUUU         UUAAGA   GUACA U
GU    -CG  GU           -------AC      UUU     U
Stem-loop sequence GAGUCUAUUUGUUAUUUCUAGAGUCUUUGUUAGUUCUUUUCAUGUCUUUACAUGUUUAGAAUUCAUUUGGAGAUAAUGGAGCAUUCUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK230088.1
ncRNA:23   GUCUUACGAGGUAAUAGAGGUUU   1
  ||||||||||=||||||||||||
targets:1361   CAGAAUGCUCUAUUAUCUCCAAA   1383

1.5 Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-73-D14 NA coding protein psRNATarget
DQ056640.1
ncRNA:23   GUCUUACGAGGUAAUAGAGGUUU   1
  ||*=||*||||||||||*|||||
targets:310   CAAGAUUCUCCAUUAUCGCCAAA   332

2.5 Arabidopsis thaliana ubiquitin family protein (At4g03360) mRNA, complete cds NA coding protein psRNATarget
NM_116574.2
ncRNA:23   GUCUUACGAGGUAAUAGAGGUUU   1
  ||*=||*||||||||||*|||||
targets:426   CAAGAUUCUCCAUUAUCGCCAAA   448

2.5 Arabidopsis thaliana Ubiquitin family protein mRNA Ubiquitin family protein(AT4G03360) coding protein psRNATarget