ncRNA ID | novel_ath_miR128 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:15749653-15749740 [+] |
Reference genome | TAIR10 |
Source | DRR014210 |
Length | 23 |
Mature sequence(if miRNA) | 66 - UUUGGAGAUAAUGGAGCAUUCUG - 88 |
Stem-loop(if miRNA) |
--    CUA  UG           GUCUUUGUU      UUU     C   GAGU   UU  UUAUUUCUAGA         AGUUCU   CAUGU U   ||||   ||  |||||||||||         ||||||   |||||   CUUA   AG  AAUAGAGGUUU         UUAAGA   GUACA U GU    -CG  GU           -------AC      UUU     U |
Stem-loop sequence | GAGUCUAUUUGUUAUUUCUAGAGUCUUUGUUAGUUCUUUUCAUGUCUUUACAUGUUUAGAAUUCAUUUGGAGAUAAUGGAGCAUUCUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK230088.1 |
|
1.5 | Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-73-D14 | NA | coding protein | psRNATarget | |||||||||
DQ056640.1 |
|
2.5 | Arabidopsis thaliana ubiquitin family protein (At4g03360) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_116574.2 |
|
2.5 | Arabidopsis thaliana Ubiquitin family protein mRNA | Ubiquitin family protein(AT4G03360) | coding protein | psRNATarget |