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BaseInfo

ncRNA ID novel_ath_miR124
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:4820404-4820494 [-]
Reference genome TAIR10
Source SRR1569250
Length 21
Mature sequence(if miRNA) 1 - UAACUAUUUUGAGAAGAAGUG - 21
Stem-loop(if miRNA) --CC       C        U      G   ACAUAUAAUAAU  A
    UCUUCUC AAAUAGUU AGGUUA CUG            UC A
    ||||||| |||||||| |||||| |||            ||
    AGAAGAG UUUAUCAA UCCAAU GAC            AG U
GUGA       U        -      A   CUCUUUGACCCC  A
Stem-loop sequence CCUCUUCUCCAAAUAGUUUAGGUUAGCUGACAUAUAAUAAUUCAAUAGACCCCAGUUUCUCCAGAUAACCUAACUAUUUUGAGAAGAAGUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_100250.4
ncRNA:21   GUGAAGAAGAGUUUUAUCAAU   1
  =*||||||||||||*|||||*
targets:46   UUCUUCUUCUCAAACUAGUUU   66

2.5 Arabidopsis thaliana Cystatin/monellin superfamily protein mRNA Cystatin/monellin superfamily protein(AT1G03710) coding protein psRNATarget
NM_001123751.1
ncRNA:21   GUGAAGAAGAGUUUUAUCAAU   1
  =*||||||||||||*|||||*
targets:10   UUCUUCUUCUCAAACUAGUUU   30

2.5 Arabidopsis thaliana Cystatin/monellin superfamily protein mRNA Cystatin/monellin superfamily protein(AT1G03710) coding protein psRNATarget