ncRNA ID | novel_ath_miR121 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:6740504-6740591 [+] |
Reference genome | TAIR10 |
Source | SRR1569250;ERR1337946 |
Length | 22 |
Mature sequence(if miRNA) | 67 - UAAAGUCAAUAAUACCUUGAAG - 88 |
Stem-loop(if miRNA) |
--   -     G        C     ----AUACCUU      AUA   UCA GGUAU AUUGACUU AAAAA           GAAACU   A   ||| ||||| |||||||| |||||           ||||||   A   AGU CCAUA UAACUGAA UUUUU           CUUUGA   C GA   U     A        A     AGUUUAAGUUU      CUC |
Stem-loop sequence | UCAGGUAUGAUUGACUUCAAAAAAUACCUUGAAACUAUAAACCUCAGUUUCUUUGAAUUUGAUUUUUAAAGUCAAUAAUACCUUGAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001342209.1 |
|
2.5 | Arabidopsis thaliana AP2/B3-like transcriptional factor family protein mRNA | AP2/B3-like transcriptional factor family protein(AT4G33280) | coding protein | psRNATarget | |||||||||
NM_001342210.1 |
|
2.5 | Arabidopsis thaliana AP2/B3-like transcriptional factor family protein mRNA | AP2/B3-like transcriptional factor family protein(AT4G33280) | coding protein | psRNATarget |