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BaseInfo

ncRNA ID	novel_ath_miR117
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:22372480-22372561 [+]
Reference genome	TAIR10
Source	SRR1569250
Length	21
Mature sequence(if miRNA)	62 - UUUGAUCAUUCUCCAUGAUAG - 82
Stem-loop(if miRNA)	--         U             U     CUCAU       G   GUCAUGGGG AUGAUCGAAUGUU GUGUA     UUUUCGU G   ||||||||| ||||||||||||| |||||     |||||||   UAGUACCUC UACUAGUUUACAA CGUAU     AGAAGUA A GA         U             -     -----       U
Stem-loop sequence	GUCAUGGGGUAUGAUCGAAUGUUUGUGUACUCAUUUUUCGUGGAUAUGAAGAUAUGCAACAUUUGAUCAUUCUCCAUGAUAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_113301.2	ncRNA:21   GAUAGUACCUCUUACUAGUUU   1   ||=|||||||||||||||||| targets:646   CUGUCAUGGAGAAUGAUCAAA   666 Target Full Sequence	1.0	Arabidopsis thaliana F-box and associated interaction domains-containing protein partial mRNA	F-box and associated interaction domains-containing protein(AT3G23960)	coding protein	psRNATarget
NM_001203858.2	ncRNA:21   GAUAGUACCUCUUACUAGUUU   1   *|*|||||||||||||||||* targets:14   GUCUCAUGGAGAAUGAUCAAU   34 Target Full Sequence	2.0	Arabidopsis thaliana Diacylglycerol kinase family protein (SPHK2), mRNA	Diacylglycerol kinase family protein(SPHK2)	coding protein	psRNATarget
NM_001341495.1	ncRNA:21   GAUAGUACCUCUUACUAGUUU   1   *|*|||||||||||||||||* targets:100   GUCUCAUGGAGAAUGAUCAAU   120 Target Full Sequence	2.0	Arabidopsis thaliana Diacylglycerol kinase family protein (SPHK2), mRNA	Diacylglycerol kinase family protein(SPHK2)	coding protein	psRNATarget