ncRNA ID | novel_ath_miR109 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:20863279-20863322 [-] |
Reference genome | TAIR10 |
Source | SRR1569249 |
Length | 20 |
Mature sequence(if miRNA) | 25 - AUAACAAGAUGUUGGACCCA - 44 |
Stem-loop(if miRNA) |
--    C    -U        CA   AUAA AAGA  GUUGGACC  U   |||| ||||  ||||||||   UAUU UUCU  CAGCCUGG  G AA    -    UU        UU |
Stem-loop sequence | AUAACAAGAUGUUGGACCCAUGUUGGUCCGACUUUCUUUUAUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK228187.1 |
|
3.0 | Arabidopsis thaliana mRNA for putative protein kinase, clone: RAFL14-63-I17 | NA | coding protein | psRNATarget | |||||||||
NM_129475.4 |
|
3.0 | Arabidopsis thaliana CRINKLY4 related 2 (CCR2), mRNA | CRINKLY4 related 2(CCR2) | coding protein | psRNATarget |