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BaseInfo

ncRNA ID novel_ath_miR104
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:14544067-14544117 [-]
Reference genome TAIR10
Source SRR1569248;SRR1986037;SRR1986038;SRR1986039;SRR1164378;SRR1266863
Length 23
Mature sequence(if miRNA) 1 - UGUGUAUGAUUGAGUAUAAGACU - 23
Stem-loop(if miRNA) UUU   A    AAUAUGACAAGAUGU
   UCU GUCA               C
   ||| ||||
   CAG AAUA               U
--U   -    UGAGUUAGUAUGUGU
Stem-loop sequence UUUUCUAGUCAAAUAUGACAAGAUGUCUUGUGUAUGAUUGAGUAUAAGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_125027.1
ncRNA:23   UCAGAAUAUGAGUUAGUAUGUGU   1
  *|||||||||||||*|||||||*
targets:922   CGUCUUAUACUCAACCAUACACC   944

2.5 Arabidopsis thaliana F-box/RNI-like/FBD-like domains-containing protein partial mRNA F-box/RNI-like/FBD-like domains-containing protein(AT5G56440) coding protein psRNATarget
NM_117637.5
ncRNA:23   UCAGAAUAUGAGUUAGUAUGUGU   1
  **|=|||*||||||*||||||||
targets:15   UUUUUUAAACUCAACCAUACACA   37

2.5 Arabidopsis thaliana F-box/RNI-like superfamily protein mRNA F-box/RNI-like superfamily protein(AT4G15475) coding protein psRNATarget