ncRNA ID | novel_ath_miR104 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:14544067-14544117 [-] |
Reference genome | TAIR10 |
Source | SRR1569248;SRR1986037;SRR1986038;SRR1986039;SRR1164378;SRR1266863 |
Length | 23 |
Mature sequence(if miRNA) | 1 - UGUGUAUGAUUGAGUAUAAGACU - 23 |
Stem-loop(if miRNA) |
UUU   A    AAUAUGACAAGAUGU    UCU GUCA               C    ||| ||||    CAG AAUA               U --U   -    UGAGUUAGUAUGUGU |
Stem-loop sequence | UUUUCUAGUCAAAUAUGACAAGAUGUCUUGUGUAUGAUUGAGUAUAAGACU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_125027.1 |
|
2.5 | Arabidopsis thaliana F-box/RNI-like/FBD-like domains-containing protein partial mRNA | F-box/RNI-like/FBD-like domains-containing protein(AT5G56440) | coding protein | psRNATarget | |||||||||
NM_117637.5 |
|
2.5 | Arabidopsis thaliana F-box/RNI-like superfamily protein mRNA | F-box/RNI-like superfamily protein(AT4G15475) | coding protein | psRNATarget |