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BaseInfo

ncRNA ID	ath-miRf10446-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - AGCUUCCAAAACGACGUCGU - NA
Stem-loop(if miRNA)	A  CAUC    UG   CGAAACGACGUCGUUUUG AA    GUUU  GAC |||||||||||||||||| ||    ||||  ||G GCUUUGCUGCAGCAAAAC UU    CGAG  UUU                   C  ----    GU
Stem-loop sequence	CGAAACGACGUCGUUUUGAAACAUCGUUUUGGACGUUUUGGAGCUUCCAAAACGACGUCGUUUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_180870.2	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1641   ACGACGGCGUUUUGGAAGCU   1660 Target Full Sequence	1.0	Arabidopsis thaliana chloroplast import apparatus 2 (CIA2), mRNA	chloroplast import apparatus 2(CIA2)	coding protein	psRNATarget
NM_001037010.2	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1573   ACGACGGCGUUUUGGAAGCU   1592 Target Full Sequence	1.0	Arabidopsis thaliana chloroplast import apparatus 2 (CIA2), mRNA	chloroplast import apparatus 2(CIA2)	coding protein	psRNATarget
NM_001345246.1	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1573   ACGACGGCGUUUUGGAAGCU   1592 Target Full Sequence	1.0	Arabidopsis thaliana chloroplast import apparatus 2 (CIA2), mRNA	chloroplast import apparatus 2(CIA2)	coding protein	psRNATarget
NM_125100.4	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1641   ACGACGGCGUUUUGGAAGCU   1660 Target Full Sequence	1.0	Arabidopsis thaliana chloroplast import apparatus 2 (CIA2), mRNA	chloroplast import apparatus 2(CIA2)	coding protein	psRNATarget
AF372929.1	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1573   ACGACGGCGUUUUGGAAGCU   1592 Target Full Sequence	1.0	Arabidopsis thaliana AT5g57180/MUL3_13 mRNA, complete cds	NA	coding protein	psRNATarget
AK316813.1	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1404   ACGACGGCGUUUUGGAAGCU   1423 Target Full Sequence	1.0	Arabidopsis thaliana AT5G57180 mRNA, complete cds, clone: RAFL08-08-G15	NA	coding protein	psRNATarget
BX830407.1	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1397   ACGACGGCGUUUUGGAAGCU   1416 Target Full Sequence	1.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZC12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AK221521.1	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1414   ACGACGGCGUUUUGGAAGCU   1433 Target Full Sequence	1.0	Arabidopsis thaliana mRNA for CIA2, complete cds, clone: RAFL07-62-M09	NA	coding protein	psRNATarget
AF359387.1	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1022   ACGACGGCGUUUUGGAAGCU   1041 Target Full Sequence	1.0	Arabidopsis thaliana CIA2 (CIA2) mRNA, complete cds	NA	coding protein	psRNATarget
AY078036.1	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||*||||||||||||| targets:1022   ACGACGGCGUUUUGGAAGCU   1041 Target Full Sequence	1.0	Arabidopsis thaliana AT5g57180/MUL3_13 mRNA, complete cds	NA	coding protein	psRNATarget
AK229258.1	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||||||||||||||** targets:1145   ACGACGUCGUUUUGGAAGAG   1164 Target Full Sequence	2.5	Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL16-54-E06	NA	coding protein	psRNATarget
BX816605.1	ncRNA:20   UGCUGCAGCAAAACCUUCGA   1   ||||||||||||||||||** targets:1168   ACGACGUCGUUUUGGAAGAG   1187 Target Full Sequence	2.5	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH58ZF02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget