ncRNA ID | novel_ath_miR98 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:13506454-13506560 [-] |
Reference genome | TAIR10 |
Source | SRR1560129 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUCUUGUUUCGGUCUUUAGAC - 21 |
Stem-loop(if miRNA) |
--  UU          UU     UG     U     --UUC  AGUACCCACGGC   CU  AGACUGAAAC  GAGAC  AACAU GAUCC     UU            U   ||  ||||||||||  |||||  ||||| |||||     ||   GA  UCUGGCUUUG  CUUUG  UUGUA CUAGG     AG            U CA  UU          UU     GU     -     UCUAC  ACACACUAAAAU |
Stem-loop sequence | CUUUAGACUGAAACUUGAGACUGAACAUUGAUCCUUCUUAGUACCCACGGCUUUAAAAUCACACAGACAUCUGGAUCAUGUUUGGUUUCUUGUUUCGGUCUUUAGAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001342074.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein mRNA | hypothetical protein(AT4G31355) | coding protein | psRNATarget | |||||||||
NM_129480.3 |
|
2.5 | Arabidopsis thaliana PATATIN-like protein 6 (PLP6), mRNA | PATATIN-like protein 6(PLP6) | coding protein | psRNATarget |