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BaseInfo

ncRNA ID	novel_ath_miR95
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr5:15521166-15521315 [-]
Reference genome	TAIR10
Source	SRR1560129
Length	21
Mature sequence(if miRNA)	1 - AUGAAUGUAUGAAUGUAUGCA - 21
Stem-loop(if miRNA)	----------    G          GA     AG       G        A          G    G       A  GU           CAUA AUUCAUGCAU  AUGUA  CAUGCAU UAUAUAUG AUGUAUGCAU UAUG AUGUAUG AU  A           |||| ||||||||||  |||||  ||||||| |||||||| |||||||||| |||| ||||||| ||           GUAU UAAGUAUGUA  UAUGU  GUAUGUA GUAUGUAC UACGUAUGUA GUAU UACGUAU UA  U ACGUAUGUAA    G          AG     AA       G        G          A    G       G  AG
Stem-loop sequence	CAUAGAUUCAUGCAUGAAUGUAAGCAUGCAUGUAUAUAUGAAUGUAUGCAUGUAUGGAUGUAUGAAUGUAUGAAUGUAUGCAUGUAUGAAUGUAUGCAUGCAUGUAUGGAUGUAUGAAUGUAUGAAUGUAUGAAUGUAUGAAUGUAUGCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001344266.1	ncRNA:21   ACGUAUGUAAGUAUGUAAGUA   1   ||||||||||||||||||||| targets:740   UGCAUACAUUCAUACAUUCAU   760 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT5G38747)	coding protein	psRNATarget
NM_001344266.1	ncRNA:21   ACGUAUGUAAGUAUGUAAGUA   1   ||||||||||||||||||||| targets:808   UGCAUACAUUCAUACAUUCAU   828 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT5G38747)	coding protein	psRNATarget
NM_001344266.1	ncRNA:21   ACGUAUGUAAGUAUGUAAGUA   1   |||||||||||||||||*||| targets:712   UGCAUACAUUCAUACAUCCAU   732 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT5G38747)	coding protein	psRNATarget
NM_001344266.1	ncRNA:21   ACGUAUGUAAGUAUGUAAGUA   1   |*|||||||||||||||*||| targets:764   UUCAUACAUUCAUACAUCCAU   784 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT5G38747)	coding protein	psRNATarget
NM_001344266.1	ncRNA:21   ACGUAUGUAAGUAUGUAAGUA   1   |*|||||||*||||||||||| targets:832   UCCAUACAUGCAUACAUUCAU   852 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT5G38747)	coding protein	psRNATarget
NM_001344266.1	ncRNA:21   ACGUAUGUAAGUAUGUAAGUA   1   |*|||=|||*||||||||||| targets:784   UACAUGCAUGCAUACAUUCAU   804 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein partial mRNA	hypothetical protein(AT5G38747)	coding protein	psRNATarget