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BaseInfo

ncRNA ID	novel_ath_miR94
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr4:3097278-3097355 [+]
Reference genome	TAIR10
Source	SRR1560129;SRR1569249;SRR1569251;ERR562741;SRR1266870;SRR1312897;SRR1312900
Length	24
Mature sequence(if miRNA)	55 - AGAAUGAAGAAGACUCUGAAGCUU - 78
Stem-loop(if miRNA)	--   --            UC   CU  UG     GUA  U   GCU  GGAGUCUUCUUU  UUC  UG  CUCGA   UC G   |||  ||||||||||||  |||  ||  |||||   || G   CGA  UCUCAGAAGAAG  AAG  AC  GAGUU   AG U UU   AG            -U   --  GU     GUG  U
Stem-loop sequence	GCUGGAGUCUUCUUUUCUUCCUUGUGCUCGAGUAUCUGGUUGAGUGUUGAGUGCAGAAUGAAGAAGACUCUGAAGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   |||||||||||*|||||||||||| targets:633   AAGCUUCAGAGCCUUCUUCAUUCU   656 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   |||||||||||*|||||||||||* targets:1793   AAGCUUCAGAGCCUUCUUCAUUCC   1816 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   |||||||||||*|||||||||||* targets:984   AAGCUUCAGAGCCUUCUUCAUUCC   1007 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   *||||||||||||||||*|||||* targets:1139   UAGCUUCAGAGUCUUCUCCAUUCC   1162 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   *||||||||||||||||*|||||* targets:1091   UAGCUUCAGAGUCUUCUCCAUUCC   1114 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   *||||||||||||||||*|||||* targets:764   UAGCUUCAGAGUCUUCUCCAUUCC   787 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   *||||||||||||||||*|||||* targets:399   CAGCUUCAGAGUCUUCUCCAUUCC   422 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget