ncRNA ID | novel_ath_miR93 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:2674969-2675036 [+] |
Reference genome | TAIR10 |
Source | SRR1560128 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCGGAUUGUUAGCGAGAAGGCACC - 24 |
Stem-loop(if miRNA) |
--       G U  C        AC UU    AA   UCGGAUU U AG GAGAAGGC  C  UUGA  A   ||||||| | || ||||||||  |  ||||  A   AGCCUGG G UC CUCUUCCG  G  AGCU  U UU       G U  -        GC UU    GG |
Stem-loop sequence | UCGGAUUGUUAGCGAGAAGGCACCUUUUGAAAAAUGGUCGAUUGCGGCCUUCUCCUUGGGGUCCGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY464651.1 |
|
0.0 | Arabidopsis thaliana At2g16170 mRNA, partial sequence | NA | coding protein | psRNATarget | |||||||||
AY227640.1 |
|
1.5 | Arabidopsis thaliana hypothetical protein (At2g05460/T20G20.19) mRNA, complete cds | NA | coding protein | psRNATarget |