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BaseInfo

ncRNA ID ath-miRf10445-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UUGAUGAUGCUGCAGCUGCA - NA
Stem-loop(if miRNA)        UUC  U    G                A  --A  -       UAU  ---G       AA
GCUACUG   GC GUUG AGCAUCAUCAAGAUUC CA   AU CAUCAAG   UC    UGUAAAU  A
|||||||   || |||| |||||||||||||||| ||   || |||||||   ||    |||||||
CGGUGAC   CG CGAC UCGUAGUAGUUCUAAG GU   UA GUAGUUU   AG    GUAUUUA  C
       UAA  U    G                A  AUG  U       -UU  AUUA       CC
Stem-loop sequence GCUACUGUUCGCUGUUGGAGCAUCAUCAAGAUUCACAAAUCAUCAAGUAUUCGUGUAAAUAAACCCAUUUAUGAUUAGAUUUUUGAUGUAUGUAUGAGAAUCUUGAUGAUGCUGCAGCUGCAAUCAGUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_115356.2
ncRNA:20   ACGUCGACGUCGUAGUAGUU   1
  **|||=|||||||||||||=
targets:960   GACAGUUGCAGCAUCAUCAG   979

3.0 Arabidopsis thaliana Integrase-type DNA-binding superfamily protein (SMZ), partial mRNA Integrase-type DNA-binding superfamily protein(SMZ) coding protein psRNATarget
AY576275.1
ncRNA:20   ACGUCGACGUCGUAGUAGUU   1
  **|||=|||||||||||||=
targets:960   GACAGUUGCAGCAUCAUCAG   979

3.0 Arabidopsis thaliana AP2 domain transcription factor (SMZ) mRNA, complete cds NA coding protein psRNATarget