ncRNA ID | ath-miRf10445-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - UUGAUGAUGCUGCAGCUGCA - NA |
Stem-loop(if miRNA) |
       UUC  U    G                A  --A  -       UAU  ---G       AA GCUACUG   GC GUUG AGCAUCAUCAAGAUUC CA   AU CAUCAAG   UC    UGUAAAU  A |||||||   || |||| |||||||||||||||| ||   || |||||||   ||    ||||||| CGGUGAC   CG CGAC UCGUAGUAGUUCUAAG GU   UA GUAGUUU   AG    GUAUUUA  C        UAA  U    G                A  AUG  U       -UU  AUUA       CC |
Stem-loop sequence | GCUACUGUUCGCUGUUGGAGCAUCAUCAAGAUUCACAAAUCAUCAAGUAUUCGUGUAAAUAAACCCAUUUAUGAUUAGAUUUUUGAUGUAUGUAUGAGAAUCUUGAUGAUGCUGCAGCUGCAAUCAGUGGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_115356.2 |
|
3.0 | Arabidopsis thaliana Integrase-type DNA-binding superfamily protein (SMZ), partial mRNA | Integrase-type DNA-binding superfamily protein(SMZ) | coding protein | psRNATarget | |||||||||
AY576275.1 |
|
3.0 | Arabidopsis thaliana AP2 domain transcription factor (SMZ) mRNA, complete cds | NA | coding protein | psRNATarget |