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BaseInfo

ncRNA ID novel_ath_miR89
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:2346449-2346664 [-]
Reference genome TAIR10
Source SRR1560128
Length 18
Mature sequence(if miRNA) 199 - UAACUGUACACCGCUAUC - 216
Stem-loop(if miRNA) --UAA         G                              A       U                           A      ------CCU  -- UUACAGAUGC
     CUGUACACC CUAUCUGUACAGCGCUGUACAGUGGUCAAA UGUAAGA AAUUUUAAAAACGUAUUUGGUUUCGAA AAAUAU         UC  U          A
     ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||         ||  |          U
     GACAUGUGG GAUAGACAUGUCGCGACAUGUCACCAGUUU ACAUUCU UUAAAAUUUUUGCAUAAACCAAAGCUU UUUAUA         CG  A          U
CGAUA         G                              -       U                           G      UACAUAUCG  AU GUUUACUACU
Stem-loop sequence UAACUGUACACCGCUAUCUGUACAGCGCUGUACAGUGGUCAAAAUGUAAGAUAAUUUUAAAAACGUAUUUGGUUUCGAAAAAAUAUCCUUCUUUACAGAUGCAUUUCAUCAUUUGAUAGCGCUAUACAUAUAUUUGUUCGAAACCAAAUACGUUUUUAAAAUUUUCUUACAUUUGACCACUGUACAGCGCUGUACAGAUAGGGGUGUACAGAUAGC