ncRNA ID | novel_ath_miR89 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:2346449-2346664 [-] |
Reference genome | TAIR10 |
Source | SRR1560128 |
Length | 18 |
Mature sequence(if miRNA) | 199 - UAACUGUACACCGCUAUC - 216 |
Stem-loop(if miRNA) |
--UAA         G                              A       U                           A      ------CCU  -- UUACAGAUGC      CUGUACACC CUAUCUGUACAGCGCUGUACAGUGGUCAAA UGUAAGA AAUUUUAAAAACGUAUUUGGUUUCGAA AAAUAU         UC  U          A      ||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||         ||  |          U      GACAUGUGG GAUAGACAUGUCGCGACAUGUCACCAGUUU ACAUUCU UUAAAAUUUUUGCAUAAACCAAAGCUU UUUAUA         CG  A          U CGAUA         G                              -       U                           G      UACAUAUCG  AU GUUUACUACU |
Stem-loop sequence | UAACUGUACACCGCUAUCUGUACAGCGCUGUACAGUGGUCAAAAUGUAAGAUAAUUUUAAAAACGUAUUUGGUUUCGAAAAAAUAUCCUUCUUUACAGAUGCAUUUCAUCAUUUGAUAGCGCUAUACAUAUAUUUGUUCGAAACCAAAUACGUUUUUAAAAUUUUCUUACAUUUGACCACUGUACAGCGCUGUACAGAUAGGGGUGUACAGAUAGC |