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BaseInfo

ncRNA ID novel_ath_miR87
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:5097037-5097098 [+]
Reference genome TAIR10
Source SRR1560128
Length 23
Mature sequence(if miRNA) 40 - CCGGUCAGCUGACACUCGAGCUA - 62
Stem-loop(if miRNA) --    -    --         U U   U    A
  GCUC AGUG  AGCUGAUCG G ACU ACCU G
  |||| ||||  ||||||||| | ||| ||||
  CGAG UCAC  UCGACUGGC C UGG UGGG U
AU    C    AG         - -   -    U
Stem-loop sequence GCUCAGUGAGCUGAUCGUGUACUUACCUAGUUGGGUGGUCCGGUCAGCUGACACUCGAGCUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_116946.1
ncRNA:23   AUCGAGCUCACAGUCGACUGGCC   1
  *||||||||||||||||||||||
targets:1472   CAGCUCGAGUGUCAGCUGACCGG   1494

0.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT4G08760) coding protein psRNATarget