ncRNA ID | novel_ath_miR87 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:5097037-5097098 [+] |
Reference genome | TAIR10 |
Source | SRR1560128 |
Length | 23 |
Mature sequence(if miRNA) | 40 - CCGGUCAGCUGACACUCGAGCUA - 62 |
Stem-loop(if miRNA) |
--    -    --         U U   U    A   GCUC AGUG  AGCUGAUCG G ACU ACCU G   |||| ||||  ||||||||| | ||| ||||   CGAG UCAC  UCGACUGGC C UGG UGGG U AU    C    AG         - -   -    U |
Stem-loop sequence | GCUCAGUGAGCUGAUCGUGUACUUACCUAGUUGGGUGGUCCGGUCAGCUGACACUCGAGCUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_116946.1 |
|
0.0 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT4G08760) | coding protein | psRNATarget |