ncRNA ID | novel_ath_miR85 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:6242873-6242955 [-] |
Reference genome | TAIR10 |
Source | SRR1560128 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCCGAUAUCGGAUCACCUAAAG - 22 |
Stem-loop(if miRNA) |
--    A      -   G          U  AAU      UU   UUAG UGAUCC AUA UGGAUACGAA GC   GAGAUC  G   |||| |||||| ||| |||||||||| ||   ||||||   AAUC ACUAGG UAU GCCUAUGCUU CG   CUCUAG  U GA    C      C   A          C  CUU      UA |
Stem-loop sequence | UUAGAUGAUCCAUAGUGGAUACGAAUGCAAUGAGAUCUUGUAUGAUCUCUUCGCCUUCGUAUCCGAUAUCGGAUCACCUAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_112705.4 |
|
0.0 | Arabidopsis thaliana transmembrane protein, putative (Protein of unknown function, DUF599) mRNA | transmembrane protein, putative (Protein of unknown function, DUF599)(AT3G18215) | coding protein | psRNATarget | |||||||||
NM_001338331.1 |
|
0.0 | Arabidopsis thaliana transmembrane protein, putative (Protein of unknown function, DUF599) mRNA | transmembrane protein, putative (Protein of unknown function, DUF599)(AT3G18215) | coding protein | psRNATarget |