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BaseInfo

ncRNA ID	novel_ath_miR84
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr2:3972710-3972780 [+]
Reference genome	TAIR10
Source	SRR1560127;SRR1560128;SRR1560129;SRR1569248;SRR1569250;ERR562741;SRR1266859;SRR1312900
Length	24
Mature sequence(if miRNA)	48 - AGAAUGAAGAAGACUCUGAAGCUU - 71
Stem-loop(if miRNA)	--   --            UC   CU  A      G G   GCU  GGAGUCUUCUUU  UUC  UG GCUCGA U U   |||  ||||||||||||  |||  || |||||| |   CGA  UCUCAGAAGAAG  AAG  AC UGAGUU G C UU   AG            -U   --  G      G U
Stem-loop sequence	GCUGGAGUCUUCUUUUCUUCCUUGAGCUCGAGUGUCUGGUUGAGUGCAGAAUGAAGAAGACUCUGAAGCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EF183194.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   |||||||||||*|||||||||||| targets:633   AAGCUUCAGAGCCUUCUUCAUUCU   656 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   |||||||||||*|||||||||||* targets:1793   AAGCUUCAGAGCCUUCUUCAUUCC   1816 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   |||||||||||*|||||||||||* targets:984   AAGCUUCAGAGCCUUCUUCAUUCC   1007 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   *||||||||||||||||*|||||* targets:1139   UAGCUUCAGAGUCUUCUCCAUUCC   1162 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   *||||||||||||||||*|||||* targets:1091   UAGCUUCAGAGUCUUCUCCAUUCC   1114 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   *||||||||||||||||*|||||* targets:764   UAGCUUCAGAGUCUUCUCCAUUCC   787 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:24   UUCGAAGUCUCAGAAGAAGUAAGA   1   *||||||||||||||||*|||||* targets:399   CAGCUUCAGAGUCUUCUCCAUUCC   422 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget