ncRNA ID | novel_ath_miR80 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:6217453-6217626 [+] |
Reference genome | TAIR10 |
Source | SRR1560126 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUGCCAUUUUUGUUAGGAACU - 21 |
Stem-loop(if miRNA) |
--      UU           C    U   --         U        G  UU       C               --        A   UUGCCA  UUUGUUAGGAA UGGA CUG  GUAUUUUGC CAAGUAUG UU  CUUGGCC AUCCACUUCUAAUGU  GUUUUGUA C   ||||||  ||||||||||| |||| |||  ||||||||| |||||||| ||  ||||||| |||||||||||||||  |||||||| U   AACGGU  GAACAAUCCUU ACCU GAC  CGUAAAACG GUUCAUGC AA  GAACUGG UAGGUGAAGAUUACG  UAAAACGU A CG      UU           A    -   GG         U        G  GG       U               UG        A |
Stem-loop sequence | UUGCCAUUUUUGUUAGGAACUGGAUCUGGUAUUUUGCUCAAGUAUGGUUUUCUUGGCCCAUCCACUUCUAAUGUGUUUUGUAACUAAUGCAAAAUGUGCAUUAGAAGUGGAUUGGUCAAGGGAAGCGUACUUGUGCAAAAUGCGGCAGUCCAAUUCCUAACAAGUUUGGCAAGC |