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BaseInfo

ncRNA ID novel_ath_miR80
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:6217453-6217626 [+]
Reference genome TAIR10
Source SRR1560126
Length 21
Mature sequence(if miRNA) 1 - UUGCCAUUUUUGUUAGGAACU - 21
Stem-loop(if miRNA) --      UU           C    U   --         U        G  UU       C               --        A
  UUGCCA  UUUGUUAGGAA UGGA CUG  GUAUUUUGC CAAGUAUG UU  CUUGGCC AUCCACUUCUAAUGU  GUUUUGUA C
  ||||||  ||||||||||| |||| |||  ||||||||| |||||||| ||  ||||||| |||||||||||||||  |||||||| U
  AACGGU  GAACAAUCCUU ACCU GAC  CGUAAAACG GUUCAUGC AA  GAACUGG UAGGUGAAGAUUACG  UAAAACGU A
CG      UU           A    -   GG         U        G  GG       U               UG        A
Stem-loop sequence UUGCCAUUUUUGUUAGGAACUGGAUCUGGUAUUUUGCUCAAGUAUGGUUUUCUUGGCCCAUCCACUUCUAAUGUGUUUUGUAACUAAUGCAAAAUGUGCAUUAGAAGUGGAUUGGUCAAGGGAAGCGUACUUGUGCAAAAUGCGGCAGUCCAAUUCCUAACAAGUUUGGCAAGC