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BaseInfo

ncRNA ID	novel_ath_miR73
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr3:13659287-13659513 [-]
Reference genome	TAIR10
Source	ERR1297326
Length	24
Mature sequence(if miRNA)	204 - AACUCCAGAAUGCAGAAUGUAUGC - 227
Stem-loop(if miRNA)	--   UC    -      A           A   G   ----------U  ACUC   UU A    CA    -        --A        -A       UA    -  UAUUU  C    U   AAC  CAGA AUGCAG AUGUAUGCAAG CUA UCC           AG    GAC  A GAUG  AAAU GUAUGAAA   UGAUGGUG  AUGCUGA  AGUG UG     UG AUGU U   |||  |||| |||||| ||||||||||| ||| |||           ||    |||  | ||||  |||| ||||||||   ||||||||  |||||||  |||| ||     || |||| U   UUG  GUUU UACGUU UACGUACGUUU GAU AGG           UC    CUG  U CUAC  UUUA CAUAUUUU   ACUACUAU  UACGAUU  UCAC AC     AC UACG G AG   -C    A      G           A   -   UUUUUAACAUU  ACUA   UU A    UC    A        GUC        AC       --    U  UGUUU  C    A
Stem-loop sequence	AACUCCAGAAUGCAGAAUGUAUGCAAGACUAGUCCUAGACUCGACUUAAGAUGCAAAAUGUAUGAAAAUGAUGGUGAAUGCUGAUAAGUGUGUAUUUUGCAUGUUUUGAGCAUCCAUUUGUCAUCACUUUAGCAUCAUAUCAUCACUGUUUUAUACAAUUUCUCAUCAUUUGUCAUCACUUUACAAUUUUUGGAUAGAUUUGCAUGCAUGUUGCAUAUUUGCGUUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT028902.1	ncRNA:24   CGUAUGUAAGACGUAAGACCUC-AA   1   |*||-|||||||||||||||||-|| targets:132   GAAU-CAUUCUGCAUUCUGGAGGUU   155 Target Full Sequence	3.0	Arabidopsis thaliana unknown protein (At5g15530) mRNA, complete cds	NA	coding protein	psRNATarget
BX833207.1	ncRNA:24   CGUAUGUAAGACGUAAGACCUC-AA   1   |*||-|||||||||||||||||-|| targets:109   GAAU-CAUUCUGCAUUCUGGAGGUU   132 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL39ZC07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX829908.1	ncRNA:24   CGUAUGUAAGACGUAAGACCUC-AA   1   |*||-|||||||||||||||||-|| targets:137   GAAU-CAUUCUGCAUUCUGGAGGUU   160 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB45ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX831635.1	ncRNA:24   CGUAUGUAAGACGUAAGACCUC-AA   1   |*||-|||||||||||||||||-|| targets:234   GAAU-CAUUCUGCAUUCUGGAGGUU   257 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH1ZG12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
BX829392.1	ncRNA:24   CGUAUGUAAGACGUAAGACCUC-AA   1   |*||-|||||||||||||||||-|| targets:158   GAAU-CAUUCUGCAUUCUGGAGGUU   181 Target Full Sequence	3.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB10ZE08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
AY086528.1	ncRNA:24   CGUAUGUAAGACGUAAGACCUC-AA   1   |*||-|||||||||||||||||-|| targets:315   GAAU-CAUUCUGCAUUCUGGAGGUU   338 Target Full Sequence	3.0	Arabidopsis thaliana clone 25607 mRNA, complete sequence	NA	coding protein	psRNATarget
AF223948.1	ncRNA:24   CGUAUGUAAGACGUAAGACCUC-AA   1   |*||-|||||||||||||||||-|| targets:225   GAAU-CAUUCUGCAUUCUGGAGGUU   248 Target Full Sequence	3.0	Arabidopsis thaliana biotin carboxyl carrier protein isoform 2 (BCCP2) mRNA, nuclear gene encoding plastid protein, complete cds	NA	coding protein	psRNATarget
NM_121557.4	ncRNA:24   CGUAUGUAAGACGUAAGACCUC-AA   1   |*||-|||||||||||||||||-|| targets:524   GAAU-CAUUCUGCAUUCUGGAGGUU   547 Target Full Sequence	3.0	Arabidopsis thaliana biotin carboxyl carrier protein 2 (BCCP2), mRNA	biotin carboxyl carrier protein 2(BCCP2)	coding protein	psRNATarget