Search result

BaseInfo

ncRNA ID novel_ath_miR72
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:22763851-22763961 [-]
Reference genome TAIR10
Source DRR014210
Length 23
Mature sequence(if miRNA) 89 - CAUUAUUGGUUGUCUCUUAGAUU - 111
Stem-loop(if miRNA) --            U           A        ---------AUUUU          U
  CAUUAUUGGUUG CUCUUAGAUUA UUCUUAGG              UUUUUUGUAA U
  |||||||||||| ||||||||||| ||||||||              ||||||||||
  GUAAUAACCAAU GAGAAUUUAAU AAGAAUCC              AAGAAACGUU G
UA            U           C        GAUUCUUACUCUAC          A
Stem-loop sequence CAUUAUUGGUUGUCUCUUAGAUUAAUUCUUAGGAUUUUUUUUUUGUAAUUGAUUGCAAAGAACAUCUCAUUCUUAGCCUAAGAACUAAUUUAAGAGUUAACCAAUAAUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
Z68495.1
ncRNA:23   UUAGAUUCUCUGUUGGUUAUUAC   1
  |=|*||||||||||||||*|||*
targets:47   AGUGUAAGAGACAACCAACAAUA   69

2.5 A.thaliana CHLH gene NA coding protein psRNATarget