ncRNA ID | novel_ath_miR72 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:22763851-22763961 [-] |
Reference genome | TAIR10 |
Source | DRR014210 |
Length | 23 |
Mature sequence(if miRNA) | 89 - CAUUAUUGGUUGUCUCUUAGAUU - 111 |
Stem-loop(if miRNA) |
--            U           A        ---------AUUUU          U   CAUUAUUGGUUG CUCUUAGAUUA UUCUUAGG              UUUUUUGUAA U   |||||||||||| ||||||||||| ||||||||              ||||||||||   GUAAUAACCAAU GAGAAUUUAAU AAGAAUCC              AAGAAACGUU G UA            U           C        GAUUCUUACUCUAC          A |
Stem-loop sequence | CAUUAUUGGUUGUCUCUUAGAUUAAUUCUUAGGAUUUUUUUUUUGUAAUUGAUUGCAAAGAACAUCUCAUUCUUAGCCUAAGAACUAAUUUAAGAGUUAACCAAUAAUGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Z68495.1 |
|
2.5 | A.thaliana CHLH gene | NA | coding protein | psRNATarget |