Search result

BaseInfo

ncRNA ID novel_ath_miR71
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:24447834-24448037 [+]
Reference genome TAIR10
Source SRR1560125;SRR3707785;SRR3707794;SRR3707795
Length 21
Mature sequence(if miRNA) 184 - CGAUGGAGAAUAGUCUGAUAG - 204
Stem-loop(if miRNA) --   C       U             C     -     -           U   -C   G      CUA        AC        --   -AA    AUAA AA
  AUC GACUGUU CUCCAUCGUCAAA UCAAA CGUUU CAGUAGCGUUU CAC  CUU GUGCUC   UGUUUUCG  GUGAACAA  ACA   UUUU    C  U
  ||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| |||  ||| ||||||   ||||||||  ||||||||  |||   ||||    |
  UAG CUGAUAA GAGGUAGCAGUUU AGUUU GCAAA GUCAUCGUAGA GUG  GAA CACGAG   ACAAAGGC  CACUUGUU  UGU   GAAA    G  U
GA   U       -             C     U     A           C   UA   A      UAG        AA        CU   GAG    ---G AA
Stem-loop sequence AUCCGACUGUUUCUCCAUCGUCAAACUCAAACGUUUCAGUAGCGUUUUCACCCUUGGUGCUCCUAUGUUUUCGACGUGAACAAACAAAUUUUAUAACAAUUAAGGAAAGGAGUGUUCUUGUUCACAACGGAAACAGAUGAGCACAAAGAUGUGCAGAUGCUACUGAAAACGUUUUGACUUUGACGAUGGAGAAUAGUCUGAUAG