ncRNA ID | novel_ath_miR71 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:24447834-24448037 [+] |
Reference genome | TAIR10 |
Source | SRR1560125;SRR3707785;SRR3707794;SRR3707795 |
Length | 21 |
Mature sequence(if miRNA) | 184 - CGAUGGAGAAUAGUCUGAUAG - 204 |
Stem-loop(if miRNA) |
--   C       U             C     -     -           U   -C   G      CUA        AC        --   -AA    AUAA AA   AUC GACUGUU CUCCAUCGUCAAA UCAAA CGUUU CAGUAGCGUUU CAC  CUU GUGCUC   UGUUUUCG  GUGAACAA  ACA   UUUU    C  U   ||| ||||||| ||||||||||||| ||||| ||||| ||||||||||| |||  ||| ||||||   ||||||||  ||||||||  |||   ||||    |   UAG CUGAUAA GAGGUAGCAGUUU AGUUU GCAAA GUCAUCGUAGA GUG  GAA CACGAG   ACAAAGGC  CACUUGUU  UGU   GAAA    G  U GA   U       -             C     U     A           C   UA   A      UAG        AA        CU   GAG    ---G AA |
Stem-loop sequence | AUCCGACUGUUUCUCCAUCGUCAAACUCAAACGUUUCAGUAGCGUUUUCACCCUUGGUGCUCCUAUGUUUUCGACGUGAACAAACAAAUUUUAUAACAAUUAAGGAAAGGAGUGUUCUUGUUCACAACGGAAACAGAUGAGCACAAAGAUGUGCAGAUGCUACUGAAAACGUUUUGACUUUGACGAUGGAGAAUAGUCUGAUAG |