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BaseInfo

ncRNA ID	novel_ath_miR64
Species	Arabidopsis thaliana
Class	miRNA
Genome position	Chr1:13305189-13305261 [-]
Reference genome	TAIR10
Source	SRR1560124
Length	21
Mature sequence(if miRNA)	1 - AUUCACUAAAGUUUAUCGACU - 21
Stem-loop(if miRNA)	--  -           -  -UA       --AUUA   U   UC AUAAAUUUUAG GA   UGACAUC      GAG U   || ||||||||||| ||   |||||||      |||   AG UAUUUGAAAUC CU   ACUGUAG      CUC A UC  C           A  UAA       GUUUGG   U
Stem-loop sequence	UCAUAAAUUUUAGGAUAUGACAUCAUUAGAGUUAUCUCGGUUUGGAUGUCAAAUUCACUAAAGUUUAUCGACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
Y14068.1	ncRNA:21   UCAGCUAUUUGAAAUCACUUA   1   |*|||||*||||||||||||* targets:71   AAUCGAUCAACUUUAGUGAAC   91 Target Full Sequence	2.0	Arabidopsis thaliana mRNA for heat shock factor 3	NA	coding protein	psRNATarget
BX829666.1	ncRNA:21   UCAGCUAUUUGAAAUCACUUA   1   |*|||||*||||||||||||* targets:94   AAUCGAUCAACUUUAGUGAAC   114 Target Full Sequence	2.0	Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB28ZE05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress)	NA	coding protein	psRNATarget
NM_121688.4	ncRNA:21   UCAGCUAUUUGAAAUCACUUA   1   |*|||||*||||||||||||* targets:203   AAUCGAUCAACUUUAGUGAAC   223 Target Full Sequence	2.0	Arabidopsis thaliana heat shock factor 3 (HSF3), mRNA	heat shock factor 3(HSF3)	coding protein	psRNATarget
NM_180501.3	ncRNA:21   UCAGCUAUUUGAAAUCACUUA   1   |*|||||*||||||||||||* targets:205   AAUCGAUCAACUUUAGUGAAC   225 Target Full Sequence	2.0	Arabidopsis thaliana heat shock factor 3 (HSF3), mRNA	heat shock factor 3(HSF3)	coding protein	psRNATarget
AY080635.1	ncRNA:21   UCAGCUAUUUGAAAUCACUUA   1   **||||*||*||||||||||| targets:1151   UUUCGAAAAUCUUUAGUGAAU   1171 Target Full Sequence	2.5	Arabidopsis thaliana unknown protein (At4g22740) mRNA, complete cds	NA	coding protein	psRNATarget
AY086067.1	ncRNA:21   UCAGCUAUUUGAAAUCACUUA   1   **||||*||*||||||||||| targets:1137   UUUCGAAAAUCUUUAGUGAAU   1157 Target Full Sequence	2.5	Arabidopsis thaliana clone 20948 mRNA, complete sequence	NA	coding protein	psRNATarget
AY054243.1	ncRNA:21   UCAGCUAUUUGAAAUCACUUA   1   **||||*||*||||||||||| targets:1172   UUUCGAAAAUCUUUAGUGAAU   1192 Target Full Sequence	2.5	Arabidopsis thaliana AT4g22740/T12H17_130 mRNA, complete cds	NA	coding protein	psRNATarget
NM_118400.4	ncRNA:21   UCAGCUAUUUGAAAUCACUUA   1   **||||*||*||||||||||| targets:1137   UUUCGAAAAUCUUUAGUGAAU   1157 Target Full Sequence	2.5	Arabidopsis thaliana glycine-rich protein mRNA	glycine-rich protein(AT4G22740)	coding protein	psRNATarget
NM_179090.4	ncRNA:21   UCAGCUAUUUGAAAUCACUUA   1   **||||*||*||||||||||| targets:1355   UUUCGAAAAUCUUUAGUGAAU   1375 Target Full Sequence	2.5	Arabidopsis thaliana glycine-rich protein mRNA	glycine-rich protein(AT4G22740)	coding protein	psRNATarget