ncRNA ID | novel_ath_miR57 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr3:11430002-11430151 [-] |
Reference genome | TAIR10 |
Source | SRR1560124 |
Length | 18 |
Mature sequence(if miRNA) | 1 - CAAACAGUCUCAAAGACG - 18 |
Stem-loop(if miRNA) |
--       A                          C     C        --G          G   AA   AUU   UCUUUGA ACUGUUUGUUUUUUAUUUUUAUGUCC GUUUG UUCAAGGU   UCUUUUGGUU UGU  CUU   G   ||||||| |||||||||||||||||||||||||| ||||| ||||||||   |||||||||| |||  |||   AGAAACU UGACAAACAAAAAAUAAAAAUAUAGG CAAAC AAGUUCCA   AGAAAACCAA ACG  GAA   U GC       C                          U     U        AAA          A   AA   GAA |
Stem-loop sequence | UCUUUGAAACUGUUUGUUUUUUAUUUUUAUGUCCCGUUUGCUUCAAGGUGUCUUUUGGUUGUGUAACUUAUUGUAAGAAGAAGCAAAACCAAAAGAAAAACCUUGAAUCAAACUGGAUAUAAAAAUAAAAAACAAACAGUCUCAAAGACG |