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BaseInfo

ncRNA ID novel_ath_miR54
Species Arabidopsis thaliana
Class miRNA
Genome position Chr3:15833428-15833540 [+]
Reference genome TAIR10
Source ERR1297325
Length 24
Mature sequence(if miRNA) 90 - GGCGGGAAAAUAUUGUCUGGAAUU - 113
Stem-loop(if miRNA) ---  UU     A         A      U        G  AAAACGA    UG  A
   UU  GGCGG AUUUUUUUG CAGAAU AUUUUUGG GG       UUAU  GA U
   ||  ||||| ||||||||| |||||| |||||||| ||       ||||  || U
   AG  CUGUU UAAAAGGGC GUUUUA UAAAGACU UU       GGUA  UU U
UUA  GU     A         G      -        G  AUAAAAG    GU  U
Stem-loop sequence UUUUGGCGGAAUUUUUUUGACAGAAUUAUUUUUGGGGGAAAACGAUUAUUGGAAUUUUUUUGAUGGGAAAAUAUUGUCAGAAAUAUUUUGGCGGGAAAAUAUUGUCUGGAAUU