ncRNA ID | novel_ath_miR45 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:3474265-3474403 [-] |
Reference genome | TAIR10 |
Source | SRR1560122;SRR1560123 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UCACUGAGACUAACUGAAGUU - 21 |
Stem-loop(if miRNA) |
--      C  UA   A      --UAAAC       G    UG A   AAC   C    -C      AUAA   CUUCAG UU  UUU AGUGGA       AGGAGAU AGUU  U UUG   UUA UUCA  AUAUGG    A   |||||| ||  ||| ||||||       ||||||| ||||  | |||   ||| ||||  ||||||    A   GAAGUC AA  AGA UCACUU       UCUUCUA UCGA  A AAC   AGU AAGU  UAUGCC    U UU      -  UC   G      UAACUCU       -    GU G   GAC   -    CU      GGAA |
Stem-loop sequence | CUUCAGCUUUAUUUAAGUGGAUAAACAGGAGAUGAGUUUGUAUUGAACUUACUUCACAUAUGGAUAAAAUAAGGCCGUAUUCUGAAUGACAGCAAGAUGAGCUAUCUUCUUCUCAAUUUCACUGAGACUAACUGAAGUU |