ncRNA ID | novel_ath_miR36 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:16723351-16723419 [+] |
Reference genome | TAIR10 |
Source | SRR1560121 |
Length | 25 |
Mature sequence(if miRNA) | 1 - ACCAUUUUAAAACUCUUGUGAACCU - 25 |
Stem-loop(if miRNA) |
--A  A   U              C    ACAAAA    CC UUU AAAACUCUUGUGAA CUUU      U    || ||| |||||||||||||| ||||    GG AAA UUUUGAGAACAUUU GAAA      A AUA  -   U              A    ACUUUU |
Stem-loop sequence | ACCAUUUUAAAACUCUUGUGAACCUUUACAAAAUAUUUUCAAAAGAUUUACAAGAGUUUUUAAAGGAUA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001334991.1 |
|
3.0 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT1G80525) | coding protein | psRNATarget |