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BaseInfo

ncRNA ID novel_ath_miR36
Species Arabidopsis thaliana
Class miRNA
Genome position Chr1:16723351-16723419 [+]
Reference genome TAIR10
Source SRR1560121
Length 25
Mature sequence(if miRNA) 1 - ACCAUUUUAAAACUCUUGUGAACCU - 25
Stem-loop(if miRNA) --A  A   U              C    ACAAAA
   CC UUU AAAACUCUUGUGAA CUUU      U
   || ||| |||||||||||||| ||||
   GG AAA UUUUGAGAACAUUU GAAA      A
AUA  -   U              A    ACUUUU
Stem-loop sequence ACCAUUUUAAAACUCUUGUGAACCUUUACAAAAUAUUUUCAAAAGAUUUACAAGAGUUUUUAAAGGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001334991.1
ncRNA:25   UCCAAGUGUUCUCAAAAUUUUACCA   1
  *|*||||==|||||||||||||||*
targets:104   UGAUUCAUGAGAGUUUUAAAAUGGA   128

3.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT1G80525) coding protein psRNATarget