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BaseInfo

ncRNA ID novel_ath_miR35
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:2362588-2362646 [-]
Reference genome TAIR10
Source ERR1297324
Length 24
Mature sequence(if miRNA) 36 - AGACGAAUCGGAUCGGGUCGACCG - 59
Stem-loop(if miRNA) --A     A    A  G      -      G
   GACGA UCGG UC GGUCGA CCGAUC U
   ||||| |||| || |||||| ||||||
   CUGCU AGCC AG CCGGCU GGCUAG U
AGA     -    -  A      A      G
Stem-loop sequence AGACGAAUCGGAUCGGGUCGACCGAUCGUUGGAUCGGAUCGGCCAGACCGAUCGUCAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_116946.1
ncRNA:24   GCCAGCUGGGCUAGGCUAAGCAGA   1
  |||||*|||*||||||||||||||
targets:1190   CGGUCUACCAGAUCCGAUUCGUCU   1213

2.0 Arabidopsis thaliana hypothetical protein partial mRNA hypothetical protein(AT4G08760) coding protein psRNATarget