ncRNA ID | novel_ath_miR28 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr2:10963713-10963791 [-] |
Reference genome | TAIR10 |
Source | SRR1560120 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UUAGUAAACUGAGAAAACAGU - 21 |
Stem-loop(if miRNA) |
--        G   C                  ---   AA   UGUUUUCU AGU UACUAACAUAAGCGUAAA   CAC  U   |||||||| ||| ||||||||||||||||||   |||   ACAAAAGA UCA AUGAUUGUAUUCGCAUUU   GUG  A UG        G   A                  AGG   AU |
Stem-loop sequence | UGUUUUCUGAGUCUACUAACAUAAGCGUAAACACAAUAUAGUGGGAUUUACGCUUAUGUUAGUAAACUGAGAAAACAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_120071.2 |
|
2.5 | Arabidopsis thaliana Malectin/receptor-like protein kinase family protein mRNA | Malectin/receptor-like protein kinase family protein(AT4G39110) | coding protein | psRNATarget |