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BaseInfo

ncRNA ID novel_ath_miR28
Species Arabidopsis thaliana
Class miRNA
Genome position Chr2:10963713-10963791 [-]
Reference genome TAIR10
Source SRR1560120
Length 21
Mature sequence(if miRNA) 1 - UUAGUAAACUGAGAAAACAGU - 21
Stem-loop(if miRNA) --        G   C                  ---   AA
  UGUUUUCU AGU UACUAACAUAAGCGUAAA   CAC  U
  |||||||| ||| ||||||||||||||||||   |||
  ACAAAAGA UCA AUGAUUGUAUUCGCAUUU   GUG  A
UG        G   A                  AGG   AU
Stem-loop sequence UGUUUUCUGAGUCUACUAACAUAAGCGUAAACACAAUAUAGUGGGAUUUACGCUUAUGUUAGUAAACUGAGAAAACAGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_120071.2
ncRNA:21   UGACAAAAGAGUCAAAUGAUU   1
  **|||||*||||||||=||||
targets:2720   CAUGUUUACUCAGUUUGCUAA   2740

2.5 Arabidopsis thaliana Malectin/receptor-like protein kinase family protein mRNA Malectin/receptor-like protein kinase family protein(AT4G39110) coding protein psRNATarget