ncRNA ID | novel_ath_miR25 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:27022139-27022230 [-] |
Reference genome | TAIR10 |
Source | SRR1560120 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUGUGUAUUCUAACGACGU - 20 |
Stem-loop(if miRNA) |
--      UGU                       -----------     A   GUCGUU   AUACACAAAAGUGAAACGGCGUC           AUGUG G   ||||||   |||||||||||||||||||||||           ||||| U   CAGCAA   UAUGUGUUUUCGCUUUGUCGCAG           UACGC A UG      UCU                       CAAAUAAAUAU     G |
Stem-loop sequence | GUCGUUUGUAUACACAAAAGUGAAACGGCGUCAUGUGAGUAGCGCAUUAUAAAUAAACGACGCUGUUUCGCUUUUGUGUAUUCUAACGACGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_105842.3 |
|
0.0 | Arabidopsis thaliana transducin family protein / WD-40 repeat family protein mRNA | transducin family protein / WD-40 repeat family protein(AT1G71840) | coding protein | psRNATarget |