ncRNA ID | novel_ath_miR20 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr1:16723352-16723418 [+] |
Reference genome | TAIR10 |
Source | SRR1560119 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CCAUUUUAAAACUCUUGUGAACCU - 24 |
Stem-loop(if miRNA) |
--  A   U              C    ACAAAA   CC UUU AAAACUCUUGUGAA CUUU      U   || ||| |||||||||||||| ||||   GG AAA UUUUGAGAACAUUU GAAA      A UA  -   U              A    ACUUUU |
Stem-loop sequence | CCAUUUUAAAACUCUUGUGAACCUUUACAAAAUAUUUUCAAAAGAUUUACAAGAGUUUUUAAAGGAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001334991.1 |
|
2.0 | Arabidopsis thaliana hypothetical protein partial mRNA | hypothetical protein(AT1G80525) | coding protein | psRNATarget |