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BaseInfo

ncRNA ID novel_ath_miR16
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:3474266-3474402 [-]
Reference genome TAIR10
Source SRR1560119;SRR1560124;SRR1560125;SRR1560127;SRR1266863;SRR1266871
Length 20
Mature sequence(if miRNA) 1 - UCACUGAGACUAACUGAAGU - 20
Stem-loop(if miRNA) --     C  UA   A      --UAAAC       G    UG A   AAC   C    -C      AUAA
  UUCAG UU  UUU AGUGGA       AGGAGAU AGUU  U UUG   UUA UUCA  AUAUGG    A
  ||||| ||  ||| ||||||       ||||||| ||||  | |||   ||| ||||  ||||||    A
  AAGUC AA  AGA UCACUU       UCUUCUA UCGA  A AAC   AGU AAGU  UAUGCC    U
UG     -  UC   G      UAACUCU       -    GU G   GAC   -    CU      GGAA
Stem-loop sequence UUCAGCUUUAUUUAAGUGGAUAAACAGGAGAUGAGUUUGUAUUGAACUUACUUCACAUAUGGAUAAAAUAAGGCCGUAUUCUGAAUGACAGCAAGAUGAGCUAUCUUCUUCUCAAUUUCACUGAGACUAACUGAAGU