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BaseInfo

ncRNA ID novel_ath_miR15
Species Arabidopsis thaliana
Class miRNA
Genome position Chr4:11209146-11209331 [+]
Reference genome TAIR10
Source SRR1560119
Length 23
Mature sequence(if miRNA) 1 - CGAAACCAAAGUUGUCGAAACUA - 23
Stem-loop(if miRNA) --  A  C   -    G    -    A   A        AA   GU C  --GC  G      G  UUAA  - GU   -CC       C   -    G
  CG AA CAA AGUU UCGA AACU UUG UUUCGUCG  GCG  G GA    GC GAGCUC GC    UC U  CGU   GACGAAA CAA AGUU U
  || || ||| |||| |||| |||| ||| ||||||||  |||  | ||    || |||||| ||    || |  |||   ||||||| ||| |||| C
  GC UU GUU UCAA AGCU UUGA AAC AAAGCAGC  UGC  U CU    CG CUCGAG CG    AG G  GCA   CUGCUUU GUU UCAA G
CU  C  A   A    -    G    -   C        -C   UG -  AAUU  G      G  --CG  C UG   AAA       A   A    A
Stem-loop sequence CGAAACCAAAGUUGUCGAAACUAUUGAUUUCGUCGAAGCGGUGCGAGCGCGGAGCUCGGCUUAAUCUGUCGUCCGACGAAACCAAAGUUGUCGAAACUAUUGAUUUCGUCAAAACGGUGCGAGCGCGGAGCUCGGCUUAAUCUGUCGUCCGACGAAACCAAAGUUGUCGAAACUAUUGAUUCCGUC