ncRNA ID | novel_ath_miR15 |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | Chr4:11209146-11209331 [+] |
Reference genome | TAIR10 |
Source | SRR1560119 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CGAAACCAAAGUUGUCGAAACUA - 23 |
Stem-loop(if miRNA) |
--  A  C   -    G    -    A   A        AA   GU C  --GC  G      G  UUAA  - GU   -CC       C   -    G   CG AA CAA AGUU UCGA AACU UUG UUUCGUCG  GCG  G GA    GC GAGCUC GC    UC U  CGU   GACGAAA CAA AGUU U   || || ||| |||| |||| |||| ||| ||||||||  |||  | ||    || |||||| ||    || |  |||   ||||||| ||| |||| C   GC UU GUU UCAA AGCU UUGA AAC AAAGCAGC  UGC  U CU    CG CUCGAG CG    AG G  GCA   CUGCUUU GUU UCAA G CU  C  A   A    -    G    -   C        -C   UG -  AAUU  G      G  --CG  C UG   AAA       A   A    A |
Stem-loop sequence | CGAAACCAAAGUUGUCGAAACUAUUGAUUUCGUCGAAGCGGUGCGAGCGCGGAGCUCGGCUUAAUCUGUCGUCCGACGAAACCAAAGUUGUCGAAACUAUUGAUUUCGUCAAAACGGUGCGAGCGCGGAGCUCGGCUUAAUCUGUCGUCCGACGAAACCAAAGUUGUCGAAACUAUUGAUUCCGUC |